Rhinichthys klamathensis goyatoka (western speckled dace): 130078096
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Entry
130078096 CDS
T09701
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00310
Lysine degradation
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130078096 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130078096 (setd1ba)
Enzymes [BR:
rkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
130078096 (setd1ba)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130078096 (setd1ba)
HMT complexes
COMPASS/SET1 complex
130078096 (setd1ba)
COMPASS/SET1 complex (yeast)
130078096 (setd1ba)
BRITE hierarchy
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
130078096
NCBI-ProteinID:
XP_056099566
LinkDB
All DBs
Position
Unknown
AA seq
1854 aa
AA seq
DB search
MSRPGERNKLNEDHGRRQSSSLANGMENNHPICNSGEKRNHHWRSYKLIIDPALKKGSHK
LYRYDGLQFSMPNHGMSPVENVRDPRMVRLWAKYKEVDLPVPKFKIDDCYIGRVPPKEVT
FAKLNDNVKEGFLTDMCKKFGDIEGVEILYNPKNKKHLGIAKVVFGTVKSAKDAVQNLHN
TSVMGNIIHVELDPKGENRQRYFQRLINGSYTPLTLPVGGEEACEVSPHSLSEALLACEP
SRRSLEGSSSAVAGTATPGGTNTPMSLDTAYSSLRQDTPQSQGTPQTPRPSGTPFSQDSS
YSSRQGTPAFQPNRVESSGGYKARRHETKFQDAYNRRPERHYVHGTGGAHRGNAEQPPSF
KQHQPPEPPSPVFAHTPPPPASANFKTAYSPYQPPMPPVYPHTEPSFHQPVQREVDYRRP
PQAPPPPSPDFMPVRDRPATPPIPEPPPAPETQPATPPPSTPEPCPSLGTPTQESKRNSL
DSRIEMLLKPFLNERGDSDAEVRMDGSPISSSSSQLSPIPPQRLSRPSSTGLEDISPTPL
PDSDDDEPILGTAALLTNSRPMSPCNMLSKSSAGEPRTPIDKMDTGHQSSGEDMEISDDE
MPGTPIASGDCAKNIVVNSAVSPMQTISMPPPGFPPLPPPQAGFPLPLPPLPPHSTVSHL
AGPPGVAPHPMLHPLAHYPHGMMPMMQVDLMSSLPQWGSVHMSFQMQTQMLSRMAQSQRQ
YSYHHFISEAAVSAGAAAAAATAMQFGGPYPPLSMVGAPAGAVGHGQPWPLPNMPKFNPA
VPPPGYEPQKEDPHKATVDGVLMVIVKELKAIMKRDLNRKIVEVVAFRAFDEWWDKQERS
AKATLTPVKTGEGKEEEKERAKPKETISSSLLENWNKVEGLGFEGMGLSIGLRGAIRLPS
FKVKRKQPPEPTSTNDNKRVRPSTPVDDELGDEESERTDLRMDRSRTDGSGSSAKRRPAR
PLGLDSEGEEEEETSGKEESSLSDHEVEPVEDASERLPSGKDMEDEEDVEKKSESDSSES
ESSDSSDEASSSSSSKSDSDSSGSESSSDYESSSEEEEEEEEEEERVVEIEDEDDDAQTS
SSSSSSSSSTSNEEDLDVKSPSTPIGPPPEEEPSELNRLEVLDKAELDHKHSTVSSIKPG
INDVRPPSPKGLPVDEPDIDLEVNIPVPKAETNLDDVGSLRPPTPTGSFADSDQDTRPKI
PAEDVPRTPGRDGPVPLESEAAIPRSLPTPSMHLPLPPNHALEARSLLPPRESLPDMLVR
GRLPTEEDIPRTPGRDLMDRPRGLGKSQSTDTVPVTPGSDAPLTGNSLSSPHIPGSPFSY
PAQSPVLSAGIPRTPGRDLTFTPAFPDSAALSAGLPIHRKASSESLEEKSLFKEPQLSAS
PQPSLPNNTASSPFPGPPLPAASLQEPPQGSSPTSAETSSPAAPKDLPVPMIDVPVPLDD
TPTKRKPGRPKSKKLSVEAPQDSEEPPAPMVASLPPDLPVNDMYPDCPSETFKGEDGDST
ALDEEENQDLTVIPQVEDRMFYDEEPVQKTRRQRRGWQELLLSMHSTVTSPRRPSFLPRS
EFEEMTILYDIWNDGIDEEDMQYLKTTYDKMLEQDNGNDWLNDTLWVHHPPTNMGSASVV
KKKRKEDGIRDHVTGCARSEGYYKIDKKDKMKYLNSSRLQSEESDVDTQGKSIPAQPLTS
TRAGSERRSEQRRLLSSFSCDSDLLKFNQLKFRKKKIRFCRSHIHDWGLFAMEPIAADEM
VIEYVGQNIRQVIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNC
YAKVITVESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaccaggagaaagaaataagctaaatgaagatcacggtagaagacagagttca
agtttggcgaacggaatggagaacaaccatcctatctgcaattcgggagagaaacgaaat
catcattggagaagttacaagttgattattgacccagcgctgaaaaagggatcgcacaaa
ctgtatcgctacgatggactgcagttcagcatgccgaaccacgggatgtcaccagtggag
aacgtccgagacccgagaatggttcgtctgtgggctaagtacaaggaggttgatctcccg
gtgcctaaatttaagatcgatgattgttacatcggtcgcgtgcccccgaaggaggtcacg
tttgccaaactcaacgacaacgtcaaagagggatttctcactgacatgtgcaagaagttc
ggcgatattgagggggtggaaattttgtacaacccgaagaacaaaaagcatctcggaata
gctaaagttgtgttcggaaccgtcaagtcggcgaaagatgctgtccagaacctgcacaac
acttctgtcatgggcaacatcatccacgtggagctggaccctaaaggtgaaaatcgccaa
aggtacttccagcgtctgatcaatggaagttatactccgctcactcttccagttggtggt
gaagaagcctgtgaagtttctccacacagcttgtctgaagccctgctggcatgcgagccc
tcgcgaagatccctcgaaggcagttcttctgcagttgcgggcacagccacgccaggtggc
accaacacgcccatgtccctcgatacggcctactccagcctaaggcaggatacgccacag
tcccagggtaccccgcaaaccccacgcccgtcaggcaccccgttctctcaggactccagc
tactccagcaggcagggcacaccggcgtttcaaccgaaccgtgtggaatcctcgggaggc
tacaaggcgaggagacatgaaaccaaattccaggacgcctacaaccgcagacccgaaaga
cactacgtccacggcacaggaggggcgcaccgtggcaacgcagagcaaccacctagtttt
aagcaacatcagccgcccgagcctccgtcgcctgtttttgcgcacacgccaccgccacca
gccagtgcgaatttcaaaactgcttactctccttatcagccgccaatgcccccagtctac
cctcacacagagccctctttccaccagcctgttcagcgggaagtggattataggagaccg
cctcaagccccacctcccccgagccccgacttcatgcccgtcagagacaggcctgctacg
ccaccaatccccgagcctccccctgcgccagaaacccaaccagctacacctcctccctcc
acgccagagccctgcccatcgctgggcacccccacccaagagtccaaacgcaacagcctg
gactcccgcatagaaatgctccttaagcccttcctgaacgagcgtggagactcggacgct
gaggtgcgcatggacgggagcccgatctcctcatcgtcctcgcagctctcccccatcccg
ccccaacggctctcgcggccgtcaagcaccggcctggaggacatcagccctaccccgctt
cctgattctgatgatgacgaacccatccttggtactgctgccctgttgacgaactctagg
cccatgtcaccctgcaacatgctcagtaaaagcagtgcaggagaaccacggacgcccata
gacaaaatggacacgggccatcagtcatcgggtgaagacatggagatttctgatgatgag
atgccaggcacaccgattgctagtggggactgtgccaaaaacattgtggtcaactctgcg
gtatctccgatgcagacaatttccatgcccccgccagggttccccccactgccccctcca
caggctggcttccccctgccgctgcctcctcttccaccccattcaaccgtttcacacctg
gctggcccacctggcgtggccccccatcctatgctacacccgttggcccattacccccat
ggcatgatgcccatgatgcaggtggacctgatgagctccttaccacagtggggcagtgtt
cacatgtcctttcagatgcagactcagatgctaagtcgcatggcgcagagccagcggcag
tactcttaccatcacttcatcagcgaagctgctgtaagtgctggcgctgctgctgctgcc
gccaccgccatgcaatttggaggcccgtatccacctctctctatggttggtgcccctgca
ggcgctgtggggcacgggcaaccctggcccctacccaacatgcccaagttcaaccctgct
gttccccctccaggctatgagccccaaaaggaagacccacacaaagccactgtggatgga
gtgcttatggttattgtcaaagagctgaaggccatcatgaaaagagatctcaaccgtaag
atagtggaggtggtggccttcagggcgtttgatgaatggtgggacaaacaggagcgatcg
gctaaggctacgcttacacctgtgaagacaggtgagggcaaagaagaggagaaagaacgg
gccaaacccaaagagactatatcctctagcttactggaaaactggaacaaggttgagggt
ctgggatttgagggaatgggtctcagtattggcctgcgcggtgccatccggttaccatcc
ttcaaggttaagaggaaacaaccccctgagccgacatccaccaatgacaacaagagggtg
cgaccatccacacctgtcgatgatgagctgggagatgaagagtcagaaagaacagatctt
cgcatggacagatccagaacggatggcagtggttcttctgccaagcgaaggccagccagg
cctctggggctggacagtgaaggcgaggaggaggaggaaacctccggtaaagaggagtca
tcgctttcagaccatgaagtggagccagtggaagatgcctctgagaggttgccctctggc
aaggatatggaggacgaggaagatgtcgaaaagaagagcgaatcagactccagcgagagt
gaatcatctgactcatcagatgaagcttctagctcatcgtcctccaaatctgattctgat
tcctctgggagtgagagctcgtccgactatgaatcgagttcggaggaggaggaggaagaa
gaggaggaagaagagcgtgtagtggaaatagaggatgaagatgacgacgcacaaacctca
tcgtcgtcttcatcttcctcatcatcgacctctaatgaagaggatcttgatgtaaaatcc
cccagtacccccataggaccaccaccagaagaagaaccaagcgagttgaacagactggag
gttttagacaaggcagagctcgatcacaaacatagtacggtgagctcaatcaagcctgga
attaatgacgtgcggcccccatcacccaaaggattgccagttgatgaacccgacatcgat
ttggaggtcaatattccagtgcccaaagctgaaaccaacctggatgatgtcggtagcttg
cgcccacccaccccaacaggttcgtttgcagatagtgatcaggacaccagaccaaagatc
cctgcagaagacgtccccagaacccctggccgtgatggcccagttcccctagagtcagag
gccgcaatccctcggtctcttcctacaccttccatgcaccttccacttccccccaatcat
gcccttgaagcacgatcccttctgccgccccgtgaatctttgccggatatgcttgtccgt
gggcggttgcctacggaagaggacatcccacgcacaccagggagagacctcatggacaga
ccacggggtttgggcaagtctcagagcactgatacggttcctgtcacaccaggtagtgac
gctccactaacaggtaacagcttgagctcgccgcatattcccggcagccctttctcttac
cctgctcaatctcctgtcctcagtgctggtatccctcggactccgggtagagaccttact
ttcaccccagctttccctgactctgctgctttatctgcaggccttcctattcacaggaag
gcctcatctgagagcttggaggagaagtctctctttaaagagcctcaactcagtgcctct
ccccagcccagcctacctaacaatacagcttcttccccattccctggtcctccccttcct
gctgcttcacttcaggagcctccccaaggctcctctcccacttctgcagagacctcctct
cctgctgctccaaaagatctacctgttccaatgatagatgttcctgtgcccttagatgat
actccaaccaagagaaaaccaggacgtcccaagtctaaaaagctgtctgttgaagcccct
caagactctgaagagcctccagctccaatggtggcctctttacctccagacctaccagta
aatgacatgtacccagactgcccttcagagaccttcaaaggtgaagatggtgattccaca
gccttggatgaagaggaaaaccaagacctgacagtcatacctcaggtggaagacaggatg
ttttatgatgaggaacctgttcagaagacacggcgacagaggcggggctggcaggagttg
ttgttgtccatgcattccactgtgacatcaccgcgccgccccagcttcttaccccgctca
gaatttgaggagatgaccatcttgtatgacatctggaatgatggcattgacgaggaggac
atgcaataccttaagaccacttacgacaagatgcttgagcaggacaatggcaacgactgg
ctcaacgacaccctctgggtccatcatcctcctaccaacatgggcagtgcatcggtggtg
aagaagaagcgaaaagaggatggtatacgagaccatgtcaccggctgcgcccgcagcgag
ggctactacaaaatcgacaagaaagacaaaatgaagtacctgaacagctcacgcctgcag
tccgaagagtctgatgtggacactcaggggaagagtattccagcacagcccttaacgtcc
actagggcaggttcagaacggcggtctgaacagcgccgtctgctgtcgtccttcagctgt
gacagtgacctcctcaaatttaaccagcttaagttccgtaaaaagaagatccggttctgt
agaagtcacattcatgactggggattgttcgccatggaacctattgctgcggatgagatg
gttatcgaatatgttggccagaatatccgacaggttattgcagacatgcgagagaagcgc
tatgaggaagagggcatcggcagtagctacatgttccgtgtggatcacgataccattata
gacgcaaccaaatgtggcaacttcgcccgcttcatcaatcatagttgcaatccaaactgt
tatgccaaggtcatcactgtggaatcacagaaaaagatcgtcatctactcccggcagcca
ataaatgttaacgaggagatcacctacgactacaagttccccattgaggacgagaagatc
ccgtgcctctgtggcgcagagaactgcagaggaaccttaaactaa
DBGET
integrated database retrieval system
