Rubripirellula lacrimiformis: K227x_09900
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Entry
K227x_09900 CDS
T07352
Symbol
sdrF
Name
(GenBank) Serine-aspartate repeat-containing protein F precursor
Organism
rlc
Rubripirellula lacrimiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Big_9
Cadherin_5
SdrD_B
Cadherin_4
Dockerin_1
DUF5766
CarboxypepD_reg
DUF1416
SpaA
POTRA_TamA_1
Motif
Other DBs
NCBI-ProteinID:
QDT02612
UniProt:
A0A517N655
LinkDB
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Position
1345907..1350409
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AA seq
1500 aa
AA seq
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MRNLRHLLSRSGLLSNEKRHRRSEKPRRSDVTQRRLGNELLEKRELLAGDILASQHNYWN
GYDVNDDHQITSRDALAIINQLGRQNSGESEVAGADGPQMFYDVNADNAVTAADALSVIN
ALGRGEEAGELVELMLNARTTGDEAIATDAGGAINVNVGEAFDLEITYDDLRLFNNRLGS
FQLFTDIEAFDSNGDPVAGVISPVLNETQRLIIDEDINTVASTAVVFSIPELPPGAQAGA
TLTYTASITDFANNTTDEVSSALQAFGYTTSQFEISSLTFDNADLGFEIHFTGDEFGNID
LPNISVDVIESNAADTINTQTVEFAPFLPDGVTPNSAAVQFNINSFSRTYNDNEEYYSSL
NRGGFSVDTGFTDIGGLANKVPLEGGGIPDVTDDGSFIEPFDAFSVRVFINQPINGLRLQ
LTPGEDREATLLYGRDDFVPQDLVLIEDTDTNNNGTAQLIVNAIGTVVSEGAFSIDPASV
TVSEADGTATFTVNRTGGTSGAVTVDFATANGTATAGSDYTANSGTLNFADGESSKTVTV
SITDDSDVEGDENFTVTISNATGGATLGTVLTSTVTISDNDVAVPGTFAIAPATTTVNEN
ANTVTFTVTRSGGTDGTVTVDFATADGTATAGSDYAANNGTLTFADGESSKTITVSITDD
STADEPNETFTVTLSNATGGAALGGVTASTVTIVDNDNTVPVPGVFSIAPETVSVNESDG
TATFTINRSTGSDGAVTVNFATANGTATAGSDYTANSGTLNFADGELSKTVTVAITDDAD
DEPNETFTVSISSATGGATLGAVTTSTATIVDNDATPVPGVLSISPETVSVNEDVGTATF
TVNRTGGSDGAVTVNFATANGSATAGSDYTSNSGTLSFADGETSKTVTVAITDDSDVESN
ETFTVSISGASGGATLGSVTTSTATIVDNDAVVVPGVLSLSPATVSVNEDAGTVVFTVNR
TGGSDGAVTVNFATSNGSATAGSDYTSNSGTLSFADGETSKTVSVSIIDDSADEAAEDFT
ISIGGPTGGATLGTVTTATATIVDNDDPVNNPPTSAPVTVTGVEDTASTFTSSTLLANAS
PGTGESGSQSVSISSVAAASTEGGQVVLNSGGNVSYTPAADFFGSDTFNVTITDTGSPAK
SATFIVTVVVASVNDAPTAVGESASVFSGTTTNISVLGNDSAGPANEPQGLTLVSATSTG
GTTSVNGDGTIAFTPNAGVTSTTISYTIRDTEGATATATVDVTVQDFIPAVITGSVFIDS
ASNLDAVINQGAAPVLNGVKDDGEQGLAGIVVRLTDSTGATVAAVQTGADGQYRFENVAP
GDYTVVYDLPNTLLPIGETFAPISVASDGTTSGSGPNMSLLGTQGSAIENSDILASSYLR
THQNIAEISQGGREGGLASLDGLGGQEFLILGAGYDGVESAEFVLSDSGDTALLVIVEEG
ESTPSVARLSAEYFVVTPDGRGVQFFGGLDDFDFVPSSNEAISEEFSNFRSAIDRAMADM
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctgcgtcacttgcttagccgctccggattgctttcaaacgagaagcggcac
cgacgctccgagaaacctcgccggagcgacgtgacccagagacgccttgggaacgagctc
ctggagaagcgggagctcctagctggcgatattcttgccagccagcacaactattggaac
ggctacgacgtcaacgacgatcaccagatcacgtcgcgtgatgcgttggcgatcatcaac
caattgggacgtcagaattctggcgaatccgaagtggccggcgctgatggcccacagatg
ttctatgacgtcaacgctgacaacgcggtcaccgcggctgacgcattgtcggtgatcaac
gcgcttggacgcggtgaggaagctggcgaacttgtcgaactgatgctgaacgcacgtacg
accggtgacgaagcgatcgcgacggatgcgggtggcgcgatcaacgtcaacgtcggcgaa
gcatttgacctggaaatcacttacgacgatttgcggctgttcaacaaccgcttgggatcc
ttccagctgttcacggacatcgaagctttcgattccaatggcgatccagtggctggcgtg
atttcgccagtcctgaacgagactcagcggctgatcatcgacgaagacatcaataccgtc
gcatcgactgcagtcgtcttttcgatccccgagctgccgccgggagctcaggctggtgct
acgctgacgtacaccgcgtcgatcacggacttcgccaacaacacgactgacgaagtttcg
agcgcgttgcaggcgtttggatacaccacttctcagttcgagatctcgtcgctgaccttc
gacaatgccgatctcggttttgaaattcacttcaccggtgacgagtttggcaacatcgac
ttgccgaacatttcggtcgatgtgatcgaaagcaacgctgccgatacgatcaatacgcag
accgtcgaatttgcgccgttcttgcccgacggcgtcacgcccaacagcgctgcggtccag
ttcaacatcaactcattcagccgcacctacaacgacaacgaagaatattactcgtcgttg
aaccgcggcggtttctcggtcgacactgggttcactgacattggcggcttggccaataag
gttccgttggaaggcggcggtatccccgacgtgaccgacgatggcagcttcatcgaaccc
ttcgacgcgttcagcgttcgtgtgttcatcaatcaaccgatcaacggactgcgtctgcag
ttgacgcctggtgaagatcgcgaagcgactttgctgtacggtcgtgacgattttgttccg
caagacttggtcttgatcgaggacaccgataccaacaacaacggcaccgctcaactgatc
gtcaacgcgatcggcactgtcgtcagcgaaggtgctttctcgatcgatccggcttccgtc
accgtcagcgaagcggatggtacggcgaccttcacggtcaatcgtacgggcggaacatcc
ggtgccgtaacggtggactttgcgaccgccaacggaacggctaccgccggttcggactac
accgccaacagcggcacgctgaactttgccgacggcgaatcgagcaagacggtgactgtt
tcgatcaccgacgattcggacgtggaaggcgacgagaactttaccgtcacgatcagcaat
gcgaccggtggtgcaacactgggaaccgtgctgacatcgaccgtgacgatctccgacaac
gacgtcgcagttcccgggacgtttgcaatcgcaccagcgaccaccacggtcaatgaaaat
gcgaacacggtgaccttcactgtcactcgatccgggggcaccgatggtacggtgaccgtg
gatttcgcaaccgctgatggaaccgccacagccggttcggactacgccgccaacaacggt
accttgacgtttgccgatggcgaatcgtccaagacgattacggtttcgattaccgacgac
agcaccgctgacgaacccaacgaaacgttcacggtcacccttagcaacgccaccggcggt
gcggccctcggcggtgtgactgcttcgaccgtaacgattgttgataacgacaacaccgtg
ccggttcccggcgtgttctcgatcgctccggaaaccgtctcggtcaacgaaagtgatggc
accgcaactttcaccatcaatcgctcgaccggcagcgacggcgctgtcacggtgaacttt
gcgaccgccaacggaaccgccaccgcaggttcggattacaccgccaacagcggcacgctc
aactttgctgacggtgaattgtcaaagaccgtcaccgtcgcgatcaccgacgacgccgat
gacgaaccgaacgaaacattcacggtcagcatcagcagtgccaccggcggtgcgactctt
ggggccgtgaccacatcgacggccacgattgtcgacaacgacgcaactccggttcccggt
gtattgtcgatcagtccggaaacggtttcggtgaatgaagacgttggcacagcaaccttc
accgtgaatcgaaccggcggcagcgatggcgcggtgaccgtcaacttcgcgaccgccaac
ggatcggcaacggctggttcggactatacgtccaacagcggcacgctaagctttgccgat
ggcgaaacatccaagaccgtcacggttgcgatcacggacgattcggacgttgaatccaac
gaaaccttcactgtttcgatcagcggtgcctccggtggtgcaaccctagggtctgtgaca
acgtcgactgccacgattgtggataatgacgctgtcgtcgttccgggcgtgctttcgctt
tcgccagctaccgtttcggtcaacgaagacgctggcacggtggtcttcaccgtcaatcgg
accggtggcagcgatggtgctgtgaccgtcaacttcgccaccagcaacggatcggcgact
gccggttcggactacacgtccaacagcggcacgctaagctttgccgacggtgaaacatcc
aagaccgtatcggtttcgatcatcgatgattcggctgatgaagccgccgaagactttacg
atttcgatcggcggcccaaccggtggtgcaactctggggaccgtaaccacggcgaccgcg
acgatcgtcgacaacgatgatcccgtcaacaatccgcccaccagcgcccctgtgacggtg
acgggtgtggaagacaccgcatcgaccttcacgtcatcgacattgctggcgaacgcatcg
ccgggaactggcgaatcgggttcacaatcggtcagcatcagcagtgttgctgcagcgtcc
accgaaggtgggcaggtcgttctgaactcaggcggcaatgtcagctacacgccggcagcc
gatttcttcgggtcggacacattcaacgtgaccatcacggacacgggatcgccagccaag
tcggccacatttatcgtcacggtggttgtcgcatcggtcaacgatgcaccgaccgcggtt
ggtgaatcggcgtccgtgttctcgggcaccacgacgaacatctcggtgctgggcaacgac
agtgctggaccagccaacgaaccgcaaggtttgacgcttgtttcggccacttcgaccggc
ggaaccacatcggtcaacggtgacggaacgatcgccttcacaccgaacgccggtgtgacc
agcacgacgatcagctacaccatccgtgacaccgaaggggcgactgcgaccgccacggtc
gatgtgacggttcaagatttcattcctgcggtgatcaccggctcggtcttcatcgacagt
gcgtccaacttggatgcggtgatcaaccaaggtgctgcaccggttctaaacggtgtcaaa
gacgacggcgagcaagggttggctgggatcgtggtccgtttgacggattcgaccggagcc
accgtggccgcagtccagacgggtgccgatggtcaataccgattcgaaaacgtcgcaccg
ggcgactacacggttgtctacgatctgccgaacaccttgttgccgattggcgaaaccttc
gctccgatcagcgtcgcatccgatggaacgacatcgggaagcggaccgaacatgtctctg
ctgggaacccagggttcggcgatcgaaaattccgacatcttggcatccagctatctgcga
actcaccaaaacatcgctgaaatcagccaggggggacgcgaaggtggcttggcatccctg
gacggacttggcggacaagagttcttgattcttggcgctggctacgacggtgtggaatcc
gcggaattcgtcctgtcggactctggtgacaccgccttgctggtcatcgtcgaagaaggc
gagtcgacaccttcggtggcacgtttgtcagccgaatactttgtcgtcacccctgacggt
cgcggagttcaattctttggcggcctagacgatttcgatttcgtcccatcgtcgaacgaa
gcgattagcgaagaattttcgaacttccgcagtgcgatcgaccgcgccatggcggacatg
taa
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