Rubripirellula lacrimiformis: K227x_55620
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Entry
K227x_55620 CDS
T07352
Name
(GenBank) Ddl-like protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc00470
D-Amino acid metabolism
rlc00550
Peptidoglycan biosynthesis
rlc01100
Metabolic pathways
rlc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K227x_55620
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K227x_55620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K227x_55620
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rlc01011
]
K227x_55620
Enzymes [BR:
rlc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
K227x_55620
Peptidoglycan biosynthesis and degradation proteins [BR:
rlc01011
]
Precursor biosynthesis
Amino acid ligase
K227x_55620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
QDT07137
UniProt:
A0A517NJ23
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All DBs
Position
7352455..7353483
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AA seq
342 aa
AA seq
DB search
MTKRRILVLVRDGHVPPLTLKGISDAEMDPWKAEFDVCETLRRLGHEVLPLGVYDDLAPI
RNALQEFEPDITFMLLEEFHGVVTYDFAVISYLELMQQPYTGCNPRGLLLSKDKALSKKV
LAYHRIPTPRFAVFPFGRKTHRPKKLSFPLFVKSVIEDASFGIAQASIVHTDEALAERVA
FLHDKTKDDVIAEQYIEGRELYVGVVGNTRLTTFPAWEMDFGKMPDDVAKIATRTVKFNR
KYQEKNNITTREADDLDPVTKDRISKICKRVYRALSMSGYARMDLRMTAAGGIYVIEANA
NPNIEYGEDFSESAEVAGITYEALLQRIVNLGLSYKAAWMAT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacgtcgtatcctagtgctggtccgcgatggacacgtcccgccgctgacgttg
aaggggatcagcgacgctgaaatggatccctggaaagccgaatttgacgtctgcgaaacg
ctgcgacgcctcgggcacgaagtgctgccgctgggcgtgtacgacgacttggccccgatc
cgcaacgcgctgcaggaattcgaacccgacatcacgttcatgctgttggaagaattccat
ggcgtggtgacctacgattttgccgtgatcagctatctggaactgatgcagcaaccgtac
accggatgcaacccacggggactgctgctcagcaaagacaaggcactgtcgaaaaaagtg
ctggcctaccaccgcatcccaacaccccgcttcgccgtctttccgtttggccgcaaaacc
catcgccccaagaagctgtcctttccgctgtttgtcaaatcggtcatcgaggacgcatcg
tttggcatcgcccaagcatcgatcgtgcacaccgacgaagcgctggccgaacgggtcgcg
ttcttgcacgacaaaaccaaagacgatgtgatcgccgaacagtacatcgaaggccgcgaa
ctgtacgtgggcgtcgtcggcaacactcgactaacaacctttcccgcttgggagatggat
ttcgggaagatgcccgatgacgtggcaaagatcgccacccgaaccgtcaagttcaatcgc
aagtaccaagagaaaaacaacatcacgacccgcgaagcggatgatcttgacccggtcacg
aaggatcgtatctcgaaaatctgcaagcgagtttatcgggcgcttagcatgagcgggtat
gcccgcatggacctgcggatgaccgctgcgggcggtatctatgtgatcgaagccaacgca
aaccccaacatcgaatacggcgaagacttttcggaatccgccgaggtcgcagggatcacc
tacgaggccctgctgcagcggatcgtcaacctggggctaagctacaaagccgcctggatg
gccacctag
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