Rhizobium johnstonii: RL0560
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Entry
RL0560 CDS
T00402
Name
(GenBank) putative epimerase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00520
Amino sugar and nucleotide sugar metabolism
rle01100
Metabolic pathways
rle01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
RL0560
Enzymes [BR:
rle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
RL0560
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CAK06053
RhizoBase:
RL0560
UniProt:
Q1MLV0
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Position
complement(605557..606603)
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AA seq
348 aa
AA seq
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MNYLGRIRAHSVQASARDANCPSGIHRAPKRVLVTGGAGFLGSHLCETLLAAGHQVICLD
NFSTGMRRNIVHLKRVDRFNVVAHDIVHPLDLEVDEIYNLACPASPRHYQADPIHTTKTC
VLGSLNLLELAARTGARILQASTSEVYGDPNVHPQVESYWGNVNSFGPRSCYDEGKRCAE
TLFFDFHNTHGVEIKIIRIFNTYGPRMRPDDGRVVSNFIVQALTGQDITIYGDGSQTRSF
CFVDDLIGGMVRMMASPSSLTGPVNLGNPGEFTIRELAEQVIGLTGSRSQIIHRALPVDD
PRQRRPDISLAMQELDWRPKIDLSSGLRQTIDYFDGLLARPARELEAV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgaactatcttggcaggattcgtgcgcactctgtacaagcttcggctcgtgatgcaaat
tgtccatccggaatacatcgcgctcccaagagagttcttgtcaccggcggtgcaggtttc
ctcggatcgcatctgtgcgagacgcttttggccgccggacaccaggtgatctgcctcgac
aacttttccaccggcatgcggcgcaatatcgtccatctgaagcgagtcgatcgcttcaat
gtcgtcgcccacgatatcgtccacccgctcgatctggaagtcgacgagatctataatctc
gcctgcccggcatcgccccggcattatcaggccgatccgatccatacgacaaagacctgc
gtgctgggctccctcaaccttctggagctggccgcgcgcaccggcgcacgtatccttcag
gcatccacatccgaagtctacggcgacccgaacgtccatccgcaggtcgaaagctactgg
ggcaacgtcaattcgttcgggccacgctcctgctatgacgagggcaagcgatgcgccgag
acgctgttcttcgacttccacaacacgcacggcgtcgagatcaagatcatccgcatcttc
aacacctacggcccgcggatgcgtccggacgacggccgcgtcgtctcgaatttcatcgtt
caggctctgacggggcaagacatcacgatatatggcgacggttcccagacccgctcgttc
tgtttcgtcgatgatctcatcggcggcatggtccgcatgatggcctcaccgtcgtcgctg
acggggcccgtcaatctcggcaatccgggcgaattcacgatccgggaattggccgagcag
gtgatcggattgaccggttccaggtcgcaaatcatccatcgcgctctgccggttgacgat
ccccgtcagcgtcgccccgatatttcgctggccatgcaggaactcgactggcggccgaag
atcgacttgtcgagcggcctgcgtcagacgatcgactatttcgatggccttctcgcccgt
ccggcacgcgaactggaggcggtctga
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integrated database retrieval system