Rhizobium johnstonii: RL1550
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Entry
RL1550 CDS
T00402
Name
(GenBank) putative alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00470
D-Amino acid metabolism
rle01100
Metabolic pathways
rle01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RL1550
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RL1550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rle01011
]
RL1550
Enzymes [BR:
rle01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RL1550
Peptidoglycan biosynthesis and degradation proteins [BR:
rle01011
]
Precursor biosynthesis
Racemase
RL1550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
CAK07045
RhizoBase:
RL1550
UniProt:
Q1MJ15
LinkDB
All DBs
Position
complement(1617758..1618927)
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AA seq
389 aa
AA seq
DB search
MWIMSEIFDAPEDDNFASAGLRLTVDLTALTENWRDMARRSGAARASAVVKADAYGMGIE
DAGEALYMAGARDFFVATVDEGVTLRLYAPEARVFVLSGIWPGTERRFFENDLVPVISSD
EQLAFWMAVLADYGDYPCALHVDTGFNRLGLHIDDAIALADDVSRPASFAPVLVMSHLAC
ADDPTHAMNRQQLESFHRVSAAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGEAVC
GMANPMRPVATAEARIIQVRSVEAGETVSYGRALQLRRESRLAIASAGYADGYMRSQSSG
GVPLRQVVPQGGQGFIAGHKVPVAGRITMDLTIFDITDLPDNAVRAGDYVELFGKNMPVD
DVARASGTIGYEILTSMGLRHERRYVAEE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcatgagcgaaattttcgacgcccccgaagacgacaactttgcctcggccggc
ctgcggttgaccgtcgacctgaccgctctgacggagaactggcgtgatatggcgcgacgc
tccggtgcggcgcgcgcctcggcggtcgtcaaggcggatgcctatggcatgggcatcgag
gatgccggcgaagcgctctatatggccggcgcgcgcgacttcttcgtcgcgaccgtcgac
gagggcgtgacgcttcgcctctatgcgcccgaggcgcgcgttttcgtgctctcaggcatc
tggccgggcaccgagcggcgcttcttcgaaaacgatctggtgccggtgatttcctccgac
gaacagctcgccttctggatggcggtgcttgccgattacggcgactacccctgcgcgctg
catgtcgataccggcttcaatcggctcggactgcatatcgacgatgcgatcgcgctcgcc
gacgacgtctcacggccggcgagcttcgcgcccgtgcttgtcatgagccacctcgcctgc
gccgatgatcccacccatgcgatgaaccggcagcagctcgaatcattccacagggttagc
gccgcttatgaaggcatcgattcaagtcttgccgcctcggccggcatctttctcggtgag
gattatcacttcgacctgacccgccccggcattgcgctctatggcggcgaagccgtctgc
ggcatggcgaacccgatgcggccggtggccacggcagaagcgcgcatcatccaggtgcgc
agcgtcgaagccggcgagaccgtcagctatgggcgggcgctgcagcttcgccgtgaaagc
cggctggcgatcgcctcggccggttatgccgatggctacatgcgcagccagtcgagcggc
ggcgtgccactgcgccaagtggtgccgcaaggcgggcaaggcttcatcgccggacacaag
gtgccggtcgccggccggatcaccatggacctgacgatcttcgatatcaccgacctgcct
gacaatgccgtgcgcgccggggattatgtcgaactgtttggaaagaacatgccggtggac
gatgtggcgcgggcatccggcacgatcggatacgagatcctgaccagcatgggcctccgc
cacgagcggcgctacgtggccgaggaatag
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