Rhizobium johnstonii: RL2801
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Entry
RL2801 CDS
T00402
Symbol
ddlA
Name
(GenBank) putative D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00470
D-Amino acid metabolism
rle00550
Peptidoglycan biosynthesis
rle01100
Metabolic pathways
rle01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RL2801 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RL2801 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RL2801 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rle01011
]
RL2801 (ddlA)
Enzymes [BR:
rle01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RL2801 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rle01011
]
Precursor biosynthesis
Amino acid ligase
RL2801 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_4
RimK
DUF6471
Motif
Other DBs
NCBI-ProteinID:
CAK08291
RhizoBase:
RL2801
UniProt:
Q1MFI3
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All DBs
Position
2963872..2964948
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AA seq
358 aa
AA seq
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MTPSPNRLRIAVLFGGRSAEHDVSVLSATNVMGALKPEKYDAVPVFITREGQWLLSSFED
GILATPSSGTEICLVPGGRGRMLAIPAHGAPHDLAKVDILFPVLHGQYGEDGSVQGAAEV
ARVPLAGCGILGSAAALDKDIAKRLLRAAGLPVARAVTIHEGAVPSLAALEGELGLPLFI
KPARQGSSVGVAKVHASQEVAPALAEAFRHDRTLLAEEFVRGREIEFSVLEDAAGELFVS
RPGEIVPAESHGFYSYDAKYIDEKGAALKVPAELPQEVETAMRDVAAKAFRAVGCDGMAR
IDFFLTDDMQFLVNEINTIPGFTDISMYSKAMAASGVTYAEIIDRLVDHGMARARRAD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatccccaaacaggctgcgcattgccgtgctcttcggcggccgctcggccgag
cacgacgtttccgtgctctcggcaaccaatgtcatgggcgcgctcaaacccgaaaaatac
gacgccgtccctgttttcatcacccgcgaggggcaatggctgctgagcagtttcgaggac
ggtatactggcgacgccatcatcaggcacggaaatctgcctcgtgccgggcggacggggc
cggatgctggcgatcccagctcatggcgcgccgcatgacctagcaaaggtcgacattctg
tttcctgtcctccacggccagtatggcgaggacggatcagtgcagggcgctgcggaggtg
gcccgcgttccactcgccggttgcggcatcctcggctccgccgctgcgctcgacaaggac
atcgccaaacgcctgctgagggcggcgggcctgccggtggcgcgcgcggtgacgatccat
gagggtgccgtcccttcactggcagccttggaaggtgagctcggcctgccgctcttcatc
aagcctgcgcgccagggatcgtcggtcggtgtcgccaaggtccatgccagccaggaagtc
gcgcctgcccttgctgaggccttccgccacgaccgcacactgctcgccgaggaattcgtg
cgcggccgtgagatcgaattcagcgtgctggaggatgcggcaggagaactcttcgtctcc
cggccgggcgagatcgtgccggcggaaagccacggtttctatagctacgatgccaaatat
atcgacgagaaaggtgcggcgctgaaagtgccggccgaactgccgcaggaggtcgagacc
gccatgcgcgacgtcgccgcaaaagccttcagggccgtcggctgcgatggcatggcccgc
atcgacttcttcctgacggatgacatgcaattcctcgtcaatgaaatcaacaccatcccc
ggcttcaccgatatcagcatgtattccaaggcgatggcggcaagcggcgttacctacgcc
gaaatcatcgaccgtctggtggaccacggcatggcgcgcgcccgacgggccgactga
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