Rhizobium johnstonii: pRL120329
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Entry
pRL120329 CDS
T00402
Name
(GenBank) putative ATP-binding component of ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL120329
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL120329
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
pRL120329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
SMC_N
AAA_22
AAA_25
AAA_29
CbiA
Motif
Other DBs
NCBI-ProteinID:
CAK12041
RhizoBase:
pRL120329
UniProt:
Q1M4D1
LinkDB
All DBs
Position
pRL12:353499..354515
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AA seq
338 aa
AA seq
DB search
MEQIAEPVLDIKGLRTVFRIRGGEITAVNNIDLTVAAGETLALVGESGSGKSVTSLSVMR
LLTRNIGVIAAGSIRLATSDGVVRDLVSLDEESMRRIRGDDIGMIFQEPMSSLNPVFTIG
DQIAEPIRIHRGADRKAAMNAAVALLESVGIPDARRRAGQYPHELSGGMRQRATIAMALA
CDPALLIADEPTTALDVTIQAQILDLLLKLQRERGMAMLFVTHNLGVVAEIAHRVAVMYA
GRIVEEGPVGEVFRNPKHPYTMGLLASMPRLGDAARMKLAGEKLAAIPGMVPSLMNMPSG
CAFSPRCKFAIEACRAAVPALEQVNPQHLSRCIRWQEI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaacagatcgccgaacccgtgctcgacatcaagggattgcgaacggtcttccgcatc
cgcggcggtgagatcacggcggtcaacaatatcgacctaaccgttgccgccggcgagacg
cttgcgctcgtcggcgaatccggctccggcaagtcggtcaccagcctgtcggtcatgcgg
ctgctcacccgcaacatcggcgtgatcgccgcaggcagcatccgccttgcgacgagcgat
ggcgtggtccgcgatctcgtctccctcgacgaagagagcatgcgcaggatcaggggcgac
gacatcggcatgatattccaggagccgatgtcgagcctcaatcctgtcttcaccattggc
gaccagatcgccgagccgatccgcatccatcgcggcgcggaccgcaaggcggcaatgaac
gcagccgtcgcgctgcttgaaagcgtcggcataccggacgcccgacgccgcgccggccaa
tatccgcacgaactgtcaggcggcatgcggcagcgcgcgacgatcgccatggcgctcgcc
tgcgatccggcgctgctgatcgccgacgagccgaccacggcgctcgacgtgacgatccag
gcgcagattctcgacctgctcctcaaattgcagcgcgagcgcggcatggccatgctcttc
gtcacccacaatctcggcgtcgtcgccgaaatcgcccatcgcgtggcggtgatgtatgcc
ggccggatcgtcgaagaagggccggtcggcgaggttttccgcaatcccaagcacccctac
acgatgggccttctcgcctccatgccgcgccttggcgatgccgcgcggatgaagctggcc
ggcgaaaagctcgcggccattcccggcatggttccgagcctgatgaacatgccgagcggc
tgcgccttttccccgcgctgcaaattcgcgatcgaagcctgtcgcgctgccgttcccgcg
ctcgaacaggtcaatccgcagcatctcagccgctgcatcagatggcaggagatctag
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integrated database retrieval system
