Rhizobium johnstonii: pRL120357
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Entry
pRL120357 CDS
T00402
Name
(GenBank) putative transposase protein
Organism
rle
Rhizobium johnstonii
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DDE_3
HTH_32
HTH_23
HTH_29
HTH_28
HTH_50
HTH_Tnp_1
LZ_Tnp_IS481
Sigma70_r4_2
Terminase_5
HTH_3
GerE
Phage_terminase
HTH_6
HTH_Tnp_ISL3
HTH_17
MerR_1
DUF746
DDE_Tnp_IS240
rve
DUF5484
Motif
Other DBs
NCBI-ProteinID:
CAK12069
RhizoBase:
pRL120357
UniProt:
Q1M4A3
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All DBs
Position
pRL12:complement(386429..387526)
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AA seq
365 aa
AA seq
DB search
MVGRQADLVVLSDADRNFLESQVRRHKAARSLSDRCRMVLLCAQGLQSKDVAERLGVHEH
TVGKWRRRFVQDGIEGLTDEYRAGRPRTVSDAQVAQVVERTLNVTPKDATHWSIRSMAAD
SGLSHTTIRRIWTAFGLQPHRAETFKLSSDPLFVDKVQDIVGLYMSPPDRAIVLCVDEKS
QIQALDREQPVLPMAPGVAERRTHTYVRNGTTSLFAALDIATGAVIGHCYKRHRATEFLD
FLKRIDAEMPSGPDVHLVMDNYATHKTPRIKAWLARRPHWHVHFTPTSASWINQVERWFA
ELTRKQLQRGVHRSTAELEADIDAFIETHNENPTPYKWVKSADQILASVKRFCQKTMNRT
SDSGD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaggcaggcggacctcgtcgttctgagcgacgcggacagaaatttcctcgaa
tctcaggtgcgccggcataaagcggcacgctcgttgtcggatcgatgccggatggtcttg
ctgtgcgcgcagggtttgcaaagcaaggacgttgccgaacgcctgggtgttcacgagcac
acggttggcaagtggcgccgcaggttcgtacaggatggtattgaagggctgacagatgaa
tatcgtgccggtcgaccgcgaactgtctccgatgcccaggttgctcaggtcgtcgagcgt
acgttgaacgtcactcccaaggatgccacgcactggtccatccgttcgatggcagccgac
agcggcctttcgcataccaccatccgtcggatctggaccgcatttggcctgcagccgcat
cgtgccgagacattcaagctttcctcagatccgctcttcgtcgataaggtgcaggacatc
gtcggcctttatatgtcgccaccggaccgggcgatcgtgctatgcgtggatgagaaatcg
caaatccaggcattggatcgcgagcagccggttctgcctatggcaccgggcgtcgccgaa
cggcgcacccatacctatgtccgcaacggcacgacttctctgttcgccgcgctcgacatt
gccactggtgcggtgatcggtcattgctacaagcgtcaccgggccactgaattcctcgac
ttcctgaagcggatcgacgccgaaatgcccagtgggccggacgtgcatctggtgatggac
aactatgcgacccacaagacgccgagaatcaaggcctggctcgcgcgccgcccacactgg
catgttcacttcacgccaacgtcggcatcctggatcaatcaggtcgagcggtggtttgca
gagctaacgcgaaagcagttgcagcgcggcgtacaccgttccaccgcagaactggaagcc
gacatcgacgccttcatcgaaacccacaacgagaaccccaccccgtacaagtgggtcaaa
tccgccgaccaaatcctcgcgtcggtcaagcgcttctgccagaagacaatgaaccgaact
tcagattcaggtgactag
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