Rhizobium johnstonii: pRL120722
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Entry
pRL120722 CDS
T00402
Name
(GenBank) putative alpha amylase
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00500
Starch and sucrose metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
Module
rle_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
pRL120722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rle04147
]
pRL120722
Enzymes [BR:
rle01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
pRL120722
Exosome [BR:
rle04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
pRL120722
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
CBM_48
DUF5696
Motif
Other DBs
NCBI-ProteinID:
CAK12431
RhizoBase:
pRL120722
UniProt:
Q1M395
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Position
pRL12:789255..791024
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AA seq
589 aa
AA seq
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MTQMTFGPAFTEEGVLFRLWAPLHESVSLTIECADPRPMQAVEDGWHHYTVADASVGKRY
RFVLPDGLEIPDPASRFQPQDVHGPSEVVDLSFYRWKTSDWTGRPWEEMVIYEMHIGSFT
PEGTFKAAIERLDHLQALGVTALQIMPLSEFPGRYSWGYDGVLPYAPDSSYGRPEDFMAL
VDAAHQRGISVFLDVVYNHFGPDGNYIPAYAPLFTDHHKTPWGNGINYDGDGSEMIREFI
IENAIYWITEFRLDGFRFDAVHAIKDDSAEHLLHALARRVRAAAGDRHVHLIVENEENDS
DLLTRDENGEVKLFTAQWNDDVHHVLHITATGETFGYYADYAGDAGKLGRALAEGFVFQG
EHMPYRGGSRGRPSGHLPPTAFISFIQNHDQIGNRALGDRVLASSPADVVRAVAAIYLLA
PEIPMLFMGEEWGATEPFPFFCDFDEDLNEKVRKGRREELSRLPGFDADDLLDPTAPSTF
AAAKLDWSKLASSEVLGFYRTLLDLRHSRIVPLLKGAGAGNAVYRSAGSALAVDWTLAQN
RRLHLHANLGAEAAPLVSQRSDGETIFRLGGSDGGNLVPWTVIWSISEA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaaatgacgttcggaccggcattcaccgaagagggtgttctattccgcctctgg
gctcccctgcatgaaagcgtgtcgttgacgatcgaatgcgctgatccgcggccgatgcag
gcggtcgaggacggctggcaccactatacggtcgcggatgccagtgtcggtaagcgctac
cgcttcgtcctgccggacggtctcgaaataccagatcccgcctcgcggtttcagccgcag
gatgtgcacgggccgagcgaagtggtcgacctttccttctatcgctggaagacgagcgac
tggacggggcgcccttgggaagagatggtgatctacgagatgcatatcggcagcttcacg
ccggagggtactttcaaggccgcgatcgagcggctcgaccatctgcaggcgctgggcgtt
acggcgctgcagatcatgccgctgagtgaatttcccggccgttacagctggggttatgac
ggcgtgcttccctatgctccggacagcagctacggccggccggaagattttatggcgctg
gtggacgcagcgcaccagcgcggcatctcggttttcctggacgtggtctacaatcacttc
gggcctgacgggaactatatccctgcctatgcgccgctctttaccgaccaccacaagacg
ccctggggcaacggcatcaactacgatggcgacggatcggagatgatccgcgagttcatc
atcgaaaacgccatctactggatcaccgagttcaggctcgacggtttccgcttcgatgcc
gtccacgccatcaaggacgacagcgccgagcatctgcttcacgcgcttgcccgccgcgtc
agggccgcggccggcgaccggcatgttcatctgatcgtcgaaaacgaggagaacgacagc
gacctgttgacgcgtgacgaaaacggggaagtgaagctgttcaccgctcagtggaacgac
gacgtgcaccatgtgctgcatatcactgccaccggcgaaaccttcggctattatgccgat
tacgccggtgacgccggcaagctcggccgggcgctggcggaaggtttcgtgtttcagggg
gaacatatgccgtaccgcggcggaagccgcggcaggccgagcggccatctgccgcccacc
gctttcatctccttcatccagaaccatgaccagatcggcaacagggcgctgggggatcgg
gttctggcttcgagcccggctgatgtcgttagggccgtcgccgccatctacctgctggcg
cctgagatcccgatgctgttcatgggggaggaatggggcgccacagaacctttccccttc
ttttgcgatttcgacgaggatctgaacgagaaggtcaggaaaggccgtcgcgaggagctt
tcccgtctcccgggcttcgacgccgacgatcttctcgacccgacagcgccatcgaccttc
gccgccgccaagctggactggtcgaaactcgcctcttccgaggtccttggtttttacagg
acgcttctcgacctccggcacagcaggatcgtgcctttgctgaaaggcgctggcgccggg
aacgcggtctatcgctcggcgggaagcgcgctcgcggtggattggaccctggcgcaaaac
cggcgtcttcatctgcacgccaacctcggcgccgaggcggcgccgctcgtctcgcagcgg
agcgatggcgagacgatcttccgtctcggcggcagcgatggcggcaatctcgtgccctgg
acggtgatctggagcatcagcgaggcgtga
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