KEGG   Rhizobium johnstonii: pRL120722
Entry
pRL120722         CDS       T00402                                 
Name
(GenBank) putative alpha amylase
  KO
K00700  1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
Organism
rle  Rhizobium johnstonii
Pathway
rle00500  Starch and sucrose metabolism
rle01100  Metabolic pathways
rle01110  Biosynthesis of secondary metabolites
Module
rle_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:rle00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    pRL120722
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rle04147]
    pRL120722
Enzymes [BR:rle01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.18  1,4-alpha-glucan branching enzyme
     pRL120722
Exosome [BR:rle04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   pRL120722
SSDB
Motif
Pfam: Alpha-amylase DUF3459 CBM_48 DUF5696
Other DBs
NCBI-ProteinID: CAK12431
RhizoBase: pRL120722
UniProt: Q1M395
LinkDB
Position
pRL12:789255..791024
AA seq 589 aa
MTQMTFGPAFTEEGVLFRLWAPLHESVSLTIECADPRPMQAVEDGWHHYTVADASVGKRY
RFVLPDGLEIPDPASRFQPQDVHGPSEVVDLSFYRWKTSDWTGRPWEEMVIYEMHIGSFT
PEGTFKAAIERLDHLQALGVTALQIMPLSEFPGRYSWGYDGVLPYAPDSSYGRPEDFMAL
VDAAHQRGISVFLDVVYNHFGPDGNYIPAYAPLFTDHHKTPWGNGINYDGDGSEMIREFI
IENAIYWITEFRLDGFRFDAVHAIKDDSAEHLLHALARRVRAAAGDRHVHLIVENEENDS
DLLTRDENGEVKLFTAQWNDDVHHVLHITATGETFGYYADYAGDAGKLGRALAEGFVFQG
EHMPYRGGSRGRPSGHLPPTAFISFIQNHDQIGNRALGDRVLASSPADVVRAVAAIYLLA
PEIPMLFMGEEWGATEPFPFFCDFDEDLNEKVRKGRREELSRLPGFDADDLLDPTAPSTF
AAAKLDWSKLASSEVLGFYRTLLDLRHSRIVPLLKGAGAGNAVYRSAGSALAVDWTLAQN
RRLHLHANLGAEAAPLVSQRSDGETIFRLGGSDGGNLVPWTVIWSISEA
NT seq 1770 nt   +upstreamnt  +downstreamnt
ttgacccaaatgacgttcggaccggcattcaccgaagagggtgttctattccgcctctgg
gctcccctgcatgaaagcgtgtcgttgacgatcgaatgcgctgatccgcggccgatgcag
gcggtcgaggacggctggcaccactatacggtcgcggatgccagtgtcggtaagcgctac
cgcttcgtcctgccggacggtctcgaaataccagatcccgcctcgcggtttcagccgcag
gatgtgcacgggccgagcgaagtggtcgacctttccttctatcgctggaagacgagcgac
tggacggggcgcccttgggaagagatggtgatctacgagatgcatatcggcagcttcacg
ccggagggtactttcaaggccgcgatcgagcggctcgaccatctgcaggcgctgggcgtt
acggcgctgcagatcatgccgctgagtgaatttcccggccgttacagctggggttatgac
ggcgtgcttccctatgctccggacagcagctacggccggccggaagattttatggcgctg
gtggacgcagcgcaccagcgcggcatctcggttttcctggacgtggtctacaatcacttc
gggcctgacgggaactatatccctgcctatgcgccgctctttaccgaccaccacaagacg
ccctggggcaacggcatcaactacgatggcgacggatcggagatgatccgcgagttcatc
atcgaaaacgccatctactggatcaccgagttcaggctcgacggtttccgcttcgatgcc
gtccacgccatcaaggacgacagcgccgagcatctgcttcacgcgcttgcccgccgcgtc
agggccgcggccggcgaccggcatgttcatctgatcgtcgaaaacgaggagaacgacagc
gacctgttgacgcgtgacgaaaacggggaagtgaagctgttcaccgctcagtggaacgac
gacgtgcaccatgtgctgcatatcactgccaccggcgaaaccttcggctattatgccgat
tacgccggtgacgccggcaagctcggccgggcgctggcggaaggtttcgtgtttcagggg
gaacatatgccgtaccgcggcggaagccgcggcaggccgagcggccatctgccgcccacc
gctttcatctccttcatccagaaccatgaccagatcggcaacagggcgctgggggatcgg
gttctggcttcgagcccggctgatgtcgttagggccgtcgccgccatctacctgctggcg
cctgagatcccgatgctgttcatgggggaggaatggggcgccacagaacctttccccttc
ttttgcgatttcgacgaggatctgaacgagaaggtcaggaaaggccgtcgcgaggagctt
tcccgtctcccgggcttcgacgccgacgatcttctcgacccgacagcgccatcgaccttc
gccgccgccaagctggactggtcgaaactcgcctcttccgaggtccttggtttttacagg
acgcttctcgacctccggcacagcaggatcgtgcctttgctgaaaggcgctggcgccggg
aacgcggtctatcgctcggcgggaagcgcgctcgcggtggattggaccctggcgcaaaac
cggcgtcttcatctgcacgccaacctcggcgccgaggcggcgccgctcgtctcgcagcgg
agcgatggcgagacgatcttccgtctcggcggcagcgatggcggcaatctcgtgccctgg
acggtgatctggagcatcagcgaggcgtga

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