Roseobacter litoralis: RLO149_c012130
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Entry
RLO149_c012130 CDS
T01572
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rli03016
]
RLO149_c012130 (truA)
Enzymes [BR:
rli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RLO149_c012130 (truA)
Transfer RNA biogenesis [BR:
rli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RLO149_c012130 (truA)
Prokaryotic type
RLO149_c012130 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEI93217
UniProt:
F7ZCI6
LinkDB
All DBs
Position
complement(1250001..1250828)
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AA seq
275 aa
AA seq
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MPEQESHLTLASELARPTPMHRYALKVEYHGAPFVGWQRQKEHSTVQGAIEQALGKIAPA
PHTIAAAGRTDAGVHAIAQVAHCDLVRDWDPFRLSEALNYHLKPAPIAITACTVVDADWH
ARFSARQRQYLFRILCRRAPATHQRGLVWQVKQNLDVAAMREAAALLIGQHDFTTFRSTI
CQAESPVKTLDRLDVSEVETPYGREIHFDVRARSFLHNQVRSFVGTLERVGAGSSTPQDV
ARALALRDRAACGPVCPPYGLYLAHVVYDRPPFEA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcaagaaagccatttgacgctggcgagcgagttggctaggcccacgcccatg
cacagatacgccctcaaagtcgaatatcacggcgcgccctttgtcggatggcagcgtcag
aaagaacattccaccgttcagggtgcgattgagcaggctttgggaaaaatcgcgccggcg
ccccatacgattgcggctgcagggcgtacggacgcaggtgtgcatgcgatcgcgcaggtg
gcacattgtgatctggtccgcgactgggatccgtttcgtttgtcagaagcgttgaattac
catctcaagcccgcgcccatcgccattaccgcctgcaccgttgtggacgcggactggcac
gcaaggttctctgcgcgtcaacgtcagtatctgttccgcatcttatgccgccgcgcccct
gcaacgcatcagagggggctggtttggcaagtcaaacaaaatctggatgtggcggccatg
cgggaagcggccgcgctgctgatcggccagcatgatttcacgacattccgctccaccatc
tgtcaggcggagagcccggtcaaaacgcttgaccgtcttgatgtgagcgaggtcgaaacg
ccctatggccgtgagattcatttcgacgtgcgcgccagatccttcctgcacaatcaggtc
cgcagttttgtgggcacgctggaacgggttggggccggttcgtccacaccgcaggatgtg
gcaagggcgctggccctgcgggatcgcgccgcctgcgggccggtttgcccgccctatggc
ctgtatctggcgcatgtggtttacgaccgcccgccgtttgaggcgtag
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