Rhizobium lentis: J0663_02375
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Entry
J0663_02375 CDS
T07189
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rln
Rhizobium lentis
Pathway
rln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J0663_02375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rln03400
]
J0663_02375
Enzymes [BR:
rln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J0663_02375
DNA repair and recombination proteins [BR:
rln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J0663_02375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QSW94136
LinkDB
All DBs
Position
complement(472200..473654)
Genome browser
AA seq
484 aa
AA seq
DB search
MRRVVLAGRGDLAEWRDAARALAAAGILPEEIDWREKTAEADLSFQRDAMPPVPATSRKP
MTVPPAFIELAETVLCHSDPARFSLLYRLLWRLQLDRQLLEVTSDEDVVRARLMAKNVRR
DAHKMTAFVRFKEIDAASAGRRKFLAWFEPDHHIVRRTAPFFQRRFNDMDWLIATPKGSA
AWDGERLTITDEACERPNLSDATDELWRTYYSSIFNPARLKVKAMQAEMPKKYWKNLPEA
DLIPGLIASAESKVREMAAREATQALPFHDRLQQAARHLPAEPQAPKGTLEALRAEAAVC
TRCPLHANATQTVFGEGPRDAQVIFVGEQPGDQEDISGRPFVGPAGRLLDQVISEAGIDR
SRLYVTNAVKHFKYEPRGKRRIHQKPNMGEVRHCRWWLDRELALLKPKLIVAMGATALAA
LTDVKERLQDVRGKAMAIDGERTLFVTVHPSYLLRIPDEQLKAEEMARFREDMLKIQRLM
VSGR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcgtcgtgcttgcaggacgcggagaccttgccgaatggcgcgatgcggcacgc
gcgcttgcggctgccggcattttgccagaggaaatcgactggcgcgagaagaccgcggag
gcggatctttcgtttcagcgcgacgccatgccgccggtgcctgcaacatcgcgcaagcca
atgacggtgccgcctgccttcatcgagcttgccgaaaccgttctctgccattccgacccg
gcgcggttttccctgctttaccgcctgctctggcggctgcaactggaccggcagttgctc
gaggtgacctccgatgaggatgtcgtgcgggccaggctgatggcgaagaacgtccggcgc
gacgcgcacaagatgacggctttcgtccgtttcaaggaaatcgatgccgcgtcggcaggc
cgtcgaaaattcctcgcctggttcgagccggatcatcatatcgtcaggcgcaccgctccc
ttttttcagcggcgctttaacgacatggactggctgatcgcaaccccgaagggatcggca
gcctgggacggcgagcgactgacgatcaccgatgaggcatgcgaaaggcccaacctcagc
gatgcgacggacgagctttggcggacctactattccagcatcttcaatccggcgcgattg
aaggtgaaggcgatgcaggcggagatgccgaagaaatactggaagaacctgccggaagcc
gatctcattcctggcctgattgcctcggccgagagcaaagtgcgggagatggcggcgcgg
gaggcgacgcaagcgctgccctttcacgaccggctgcagcaggccgcgcgccatctgccc
gccgaaccgcaggcaccgaagggaacgctggaagcgctgcgcgcggaagccgccgtctgc
acccgctgtccgcttcatgccaatgcgacgcagacggtgttcggcgaggggccgcgggat
gcacaggtcatcttcgtcggcgagcagccgggtgaccaggaggatatttcggggcgtccc
ttcgtcggccccgccggcaggcttctcgatcaggtgatatcggaagcgggcatcgaccgt
tcgaggctttatgtcaccaatgctgtcaaacatttcaaatacgagccgcgcggcaagcgg
cgcatccaccagaaacccaacatgggcgaggtaaggcattgccgctggtggcttgatcgg
gagttggcgctcctcaagccgaagctgatcgtcgcgatgggggcgaccgcgcttgcggcg
ctgaccgatgtgaaggagcgcctgcaggatgtcaggggcaaggcgatggcgatcgacggc
gaacgcacgcttttcgtgaccgtgcatccgtcctatctcctgcgtattccggacgaacaa
ctgaaggcggaggagatggcgcggtttcgcgaggacatgctgaaaattcagcggcttatg
gtgtcaggtagataa
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