Ruminococcus lactaris: NQ541_05420
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Entry
NQ541_05420 CDS
T08757
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rlr
Ruminococcus lactaris
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rlr03009
]
NQ541_05420
Enzymes [BR:
rlr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NQ541_05420
Ribosome biogenesis [BR:
rlr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NQ541_05420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ub-Mut7C
zf-U11-48K
ThiS
ThiS-like
Motif
Other DBs
NCBI-ProteinID:
UWP66527
LinkDB
All DBs
Position
1165533..1166447
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AA seq
304 aa
AA seq
DB search
MEQMSLISKKKGERIDKFLGENLDDLSRSYIQKLLKDGLILVNGKKVKANYKLNEGDQID
VEVPDPEPLDIAAENIPLDILYEDEDILIVNKPKGMVVHPSPGHPDHTLVNAILYHCGEH
LSGINGVIRPGIVHRIDMNTTGSLLICKNDHAHQILAEQLKEHSITRRYHAIVHGSLKAD
TGTVNASIGRHPTDRKKMSTKALNGRHAVTHYRVLERLGNYTYIECELETGRTHQIRVHM
ASIGHPILGDDVYGPAKCPFHLEGQTLHAKILGITHPATGEYMEFDAPLPEYFMKLLSTL
RQKK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaacagatgagtctcatatctaaaaaaaaaggggaaagaatcgacaagtttctcgga
gagaatctggacgatctttcccgttcttatattcagaaacttttaaaggacggtctgatc
cttgtgaatgggaaaaaggtgaaagcaaattataagctgaatgagggggatcagattgat
gtggaagtgccggatccggaaccgctggatattgcagcagaaaatattccgctggatatt
ctgtatgaagatgaagatattttgatcgtgaataaacccaaggggatggtcgtacacccg
tctcccggacacccggatcatacgctggtcaatgcgatcctgtatcattgcggagaacat
ttgtccgggattaacggtgtgatccgtccggggatcgtacatcggatcgatatgaataca
acaggatcacttctgatctgtaagaatgaccatgcacatcagatccttgcggaacagtta
aaagaacattcgatcacccgaagataccatgcaatcgttcatggctctttaaaggctgat
acaggcactgtaaatgcttcaataggcagacatccgaccgaccgtaaaaaaatgagtaca
aaggctcttaacggccgtcatgcagtaacgcattatagagtgctggaacgtctgggaaat
tatacatatatcgagtgtgaacttgagacaggaagaacgcatcagatccgggtgcatatg
gcaagtatcggacatccgatcctgggggatgatgtgtatggtccggcaaaatgtccgttt
catttggaggggcagacgctgcatgcaaagatcctggggatcacgcatcctgctaccgga
gagtatatggaatttgatgctccgctcccggagtactttatgaagcttttaagtacactg
cggcaaaagaagtaa
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