Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0676
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Entry
Rmag_0676 CDS
T00438
Name
(GenBank) ABC transporter related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rmag_0676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rma02000
]
Rmag_0676
Enzymes [BR:
rma01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Rmag_0676
Transporters [BR:
rma02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Rmag_0676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_15
AAA_22
AAA_29
AAA_21
ABC_ATPase
AAA_16
ResIII
MMR_HSR1
Dala_Dala_lig_N
TsaE
AAA_28
AAA_14
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABL02417
UniProt:
A1AWW0
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All DBs
Position
728199..729926
Genome browser
AA seq
575 aa
AA seq
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MPMQYKQFIYHLFIYLKPHVGKLVFTSVMIMLATVLESSVPEITGRIVDELFATQRESRT
AFIYAFALFGIVVLSSLFALTSTAVSSWVSNKVIMDLRVTMFAKLLKLPKSYFDQHPTGK
TLSKLTFDVEQIADSASTIWLDFIKSSMTVVILISYLFYKNWQLSLTLLVLLPLMYLAVK
LSSNRMRRSSIKVQKSMGDMTHLLNENISGNTLVKIYHAQSQISEKFNSLIKNIRQQHFK
VDMSSSFNTAFVNILIGLSLSSVVYFSSTSLQMSAGEFLSFFTAMGMLLKPAKSLVNINK
PLQNAMAAGESVFGLINEKKESNVGTKKLKKPKGAIQFNDVSFGYNHNTIVLKRINLDIK
SGETIAFIGATGSGKTTIIKLLMRFYSPKQGSITVDGIDINQFEIDSFRSNIAFVDQNVQ
LFNDSIRGNIALGQLGTMSDKQIKLSAIAANADEFIQQLEHGFDTQIGENGVSLSGGQRQ
RLAIARAIAKDSPILILDEATSALDNVTEKQVQNAIHEMQKDRTTIIIAHRLSTIQKADR
IIVLRHGSIIEQGTHQELLEHRGEYTQLYKHQFEN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgcaatacaaacaattcatctaccatctatttatttatttaaaaccgcacgtt
ggtaaactggtctttacctcagtcatgataatgctggcaacagtgcttgagagttcggtg
ccagaaatcacaggtagaattgttgatgagttatttgcaactcaacgtgaatcaagaact
gcgtttatttatgcttttgctttgtttggtattgttgttcttagttcattgtttgcactt
acttctactgcggttagttcttgggtatctaataaagtgattatggatttacgcgttacc
atgtttgctaaattactgaaattacctaagtcgtattttgatcaacaccctacgggaaaa
acattatctaaactaacttttgatgttgagcaaattgcagacagtgcttcaactatttgg
ctagattttattaaatcatcaatgactgtcgttattctaattagttatttattttataaa
aactggcagctaagtttaacgcttttagtgcttctaccactgatgtatttagctgttaaa
ctgtcttctaatcgtatgcgtcgttcaagtatcaaggtgcagaaatcaatgggtgatatg
acacatttacttaatgaaaatatttctggcaacaccttggttaaaatttatcacgctcaa
tctcaaataagtgaaaaatttaacagcctgattaaaaatattcgtcaacaacattttaaa
gttgatatgagtagtagctttaataccgctttcgttaatattttaattggcttatcttta
agtagcgtggtgtatttttcctccacttcactacaaatgagcgcaggtgaatttttgtct
ttttttactgcaatgggtatgctacttaagcctgctaaaagtttagttaatatcaacaaa
cctttacaaaatgcaatggcagcgggtgaaagtgtatttggacttattaacgaaaaaaaa
gaatctaatgttggcactaaaaaactaaaaaaacctaaaggcgctattcaatttaacgac
gtatcatttggttataaccataatacaatcgttcttaaacgtatcaatctagacatcaaa
tcaggtgaaacaattgcatttattggcgcaacaggtagtggtaaaactactattattaaa
ttattgatgcgcttttattcaccaaaacaaggttctattactgttgatggtatagatatt
aatcagtttgaaattgattcatttcgctcaaatattgcctttgttgatcaaaatgtgcaa
ttatttaatgattctattagaggcaatattgctttaggacaactaggaaccatgtcagat
aaacaaatcaaactctcagcaattgctgccaatgctgatgaatttattcaacaactagaa
catgggtttgatacgcaaattggtgaaaatggcgtgtcactttcaggcggacaacgccaa
cgacttgctattgcaagggcaattgctaaagacagccctatcttaattttagacgaagcg
acctcagcattagataacgttactgaaaaacaagtacaaaatgcgattcatgaaatgcaa
aaagacagaactactattattatcgcccatcggctaagcaccattcaaaaggccgaccgt
attattgtactgcgtcatggtagtatcattgaacaaggaactcatcaagagctattagag
catcgaggtgaatatactcaactgtataaacaccaatttgaaaattaa
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