Rhopalosiphum maidis (corn leaf aphid): 113554077
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Entry
113554077 CDS
T06065
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113554077
Spliceosome [BR:
rmd03041
]
Common components
Common spliceosomal components
General mRNP proteins
113554077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
113554077
NCBI-ProteinID:
XP_026813560
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All DBs
Position
4:complement(30923319..30929435)
Genome browser
AA seq
832 aa
AA seq
DB search
MESDNSTNSDDSQSNNSSQSASPETVTREQSVSGSPSASSHNSAPQSPDNNSSGSQSIDN
GIQSPEQDNDDDEDDDDPQSPDSSSSKSKSPVVEPCSPEHQQNDEPQSPSSESSSSSRVS
STAGSPDRNSHSRPSSKVSSRSNESDKETKEPHDNYLSDVSDEDSMDNINDDNASQKSAK
EWKSDNDTHSPSKEIVIPVNGHNNVDAKIEPNVVNDPEEPLDFEAEDGEDGECDEPKPVK
DETEVEEEKEPEELEEGEVSDEGEHRPEETEPRPICRFYSRGQCTWGASCRFLHPGVADK
GNYSMFEMVRPIPPPGSLPSFYPNDSYRTHERTLIPGGPIAPIKKDDIPPVETAWERGLR
QAKEILKKSNKKKETDIDFEEKKMNLTSNQEEVEKENDYYAQRPTSPTASPALSPPIERF
KPDLEARHHRGPPPDAYVDEFMPPQVDFYHHRPEFWPPHHGRPLPHFPPGHPIDFHAPPR
RNPYYPYPPPEPYYHPGLKPHHRGLPPKYPPNREVIMQRSEKSYSPQPSGHRNRRDRSSS
RPRRGDDWSDPWMRSKSPGGRSKLRGRKKSYSSHSSFSSSSNVNRSSSSSSNSSYSSRSR
SRGRSNSITKNRKKAPPLSFKTSPGRKTSRKPERNPSPDAFDKKPMSRSMNPPVPTNRWS
VSPTNTPASIQPVQRARQMPMPPRFAVNKSSGVKSPATTHTSSSSSSSESASGSGSSESS
DSSGSESSSEGGSPKQKKLGLSPNKLLKKKMQKAEMKLNKKKMAAPIVPSVKKEKSISQG
KKRSLESDNDDTKSSSPPRKKGGAAPSRREELLKQLKAVEDAIARKKSKVAL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagacaattctacaaattctgatgactcgcaatcaaataactcaagccaatct
gcatcaccagaaactgtaactagagagcaatctgtcagcggttcaccttcagcatccagt
cataattctgccccacaaagccccgacaataatagttctgggtctcaaagcatagataat
ggaatacaaagtccagaacaggacaatgatgatgatgaagatgatgatgatcctcagtca
cctgatagttcatcatctaaatcaaaaagtcctgttgtcgaaccttgtagtcctgaacat
caacaaaatgatgagccacaaagtccgagttcagaatctagctcatcgagtcgtgtatct
tctacagctggttctcctgacagaaatagccattctcgaccgtcatccaaagtttcttca
agaagcaatgaatctgataaagaaacaaaagaacctcatgataattacttatcggatgtt
tctgatgaagactcaatggacaatataaatgatgataatgcttcccaaaaaagtgcaaaa
gaatggaaaagtgataatgatactcattctccttcgaaagaaattgttattccagttaat
ggtcataacaatgtggatgctaagattgagcctaatgtagttaatgaccctgaagaacct
ttagactttgaagctgaagacggagaagatggggaatgcgatgaaccaaagccagttaaa
gacgagactgaggttgaagaagaaaaagaacctgaagaactcgaagaaggtgaagtttct
gatgaaggtgaacatcgcccagaagagacagaacccaggccgatatgtcgattttactcg
agaggtcaatgtacatggggtgcaagctgtcgatttttacatccgggtgtcgctgataaa
ggcaattattcaatgtttgaaatggtacgcccaataccaccacctggtagtttaccatcg
ttttatccaaatgattcttatcgaacacatgaaagaactttgattcctggaggtccgatt
gcaccaataaaaaaagatgatataccacctgttgaaactgcttgggaaagaggattacgt
caagctaaagagatacttaaaaagtctaataaaaaaaaagaaactgatattgactttgaa
gaaaaaaaaatgaacttaacatcaaatcaagaagaagtagaaaaagaaaatgattactat
gcgcagcgtccaacaagtccaactgcttcacctgcactaagccctcctattgaaagattc
aaacctgatttagaagctcggcatcataggggtcctcctccagatgcttatgtggatgaa
tttatgccaccacaagtagatttttaccatcaccgaccagaattttggcctccccatcat
ggtcgtcctttaccacattttcctcctggacatccaattgattttcatgctcctccacga
agaaatccatattatccatatccaccacctgaaccttattatcatcccggtttgaaacct
caccatcgaggtttgcctcctaagtaccctcctaatagagaagtaataatgcagcgctct
gaaaaatcatacagtcctcaaccttctggtcatcgtaatagaagagatagatcatcaagt
cgaccacgaagaggagatgattggtctgatccatggatgagatctaaatcacctggaggt
cgatctaagcttagaggaagaaagaagtcttattcttctcattcttcattctcatcttcg
agtaatgttaacagatccagcagtagttcaagtaactcaagttatagctcgcgtagtcgt
tcaagaggtagatctaattcaattacaaaaaataggaagaaagcacctccattatcattt
aaaacatctcctggtcgtaaaactagtagaaagccagagagaaatccttctccagatgca
tttgacaaaaaaccaatgagtcgatcaatgaatcccccagtgccaaccaatagatggtct
gtttctccaactaatacaccagcttctatacaacctgtacagagagccagacaaatgcca
atgccacctaggtttgcagtaaataaatcaagtggggttaagtctccagctactactcat
acctcttcatcttcatcgagcagtgaatcagcctctggatcaggttcttcagaatcttct
gactcgagtggttcagaatcttcatctgaaggaggaagtccaaaacaaaaaaaactagga
ttgtctcccaataaattgcttaaaaaaaaaatgcagaaagcagaaatgaaattaaataag
aagaaaatggcagctccaatcgtcccttcagttaaaaaagaaaaatcaatttctcaagga
aaaaagagatcattagaatccgataatgatgatactaaaagttcttctcctccaagaaag
aaaggaggagcagcaccatcaagacgagaagagttgttaaaacaattgaaggctgtagaa
gatgccattgctcgtaaaaagtccaaagtagcattgtaa
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