KEGG   Rhopalosiphum maidis (corn leaf aphid): 113555486
Entry
113555486         CDS       T06065                                 
Name
(RefSeq) histone deacetylase Rpd3-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03082  ATP-dependent chromatin remodeling
rmd03083  Polycomb repressive complex
rmd04213  Longevity regulating pathway - multiple species
rmd04330  Notch signaling pathway
rmd04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113555486
   03083 Polycomb repressive complex
    113555486
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    113555486
   04350 TGF-beta signaling pathway
    113555486
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    113555486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rmd03036]
    113555486
Enzymes [BR:rmd01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     113555486
Chromosome and associated proteins [BR:rmd03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     113555486
   HDAC complexes
    Sin3A-HDAC complex
     113555486
    BRAF-HDAC complex
     113555486
    REST complex
     113555486
    SHIP complex
     113555486
    MiDAC complex
     113555486
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     113555486
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    113555486
  Chromatin remodeling factors
   NuRD complex
    113555486
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 113555486
NCBI-ProteinID: XP_026815613
LinkDB
Position
3:61093365..61106424
AA seq 488 aa
MSITPLKKRVCYHYDSDIGNYYYGQGHPMKPHRISMTHNLILNYGLYQKMEISRFNEITA
EEMTKFHSNEYIQFLRTICPNNKRYYHKKMQRFNVGEDCPVFDGLYTFCQLSAGGSVAAA
VKLNKQSADICINWGGGFHHAKKSKASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGD
GVEEAFYTTDRVMTVSFHKHGKYFPGTGDLGDIGAEEGKYYAVNIPLRDGMDDDSYESIF
VPIITKVMETFQPSAVVLQCGADSLTGDKLGCFNLTVKGHGKCVEFVKRYGLPFLMVGGG
GYTIRNVSRCWTYETAVALGAEIANELPNNDYYEYFGPDFKLHISPSNMINRNASEYLEK
IKNRLFENLRMLPHAPGVQVQAIPEDGVHNESDDEDNVNPDERNPQSITDKKISPDNEFS
DSEDEGMAPGVGGGGRKDNRSYKAVTPARKQACLDSNRIEVNEPKFDILKDDKEDKSDDS
NKNDAVKS
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgtctatcacaccgctcaagaaacgcgtctgttaccattacgacagtgacataggaaac
tattattatggacaaggtcatcctatgaaaccacataggatttcaatgactcataatttg
attttaaattatggtttatatcaaaaaatggaaatatccagatttaatgaaattactgca
gaagaaatgaccaaatttcatagtaatgagtacatacagttcttaagaactatttgtcct
aataataagagatattatcataaaaaaatgcaaagattcaatgttggtgaagattgtcca
gtttttgatggtttatatacattttgtcagctatctgcgggcggttcagtagcagcagct
gtaaaattaaataaacaatctgcagatatttgtatcaattggggaggtggttttcatcac
gcaaaaaaatctaaagccagtggcttttgttatgttaatgatatagtacttggtatatta
gaattgcttaaataccatcaacgagtgttgtacattgatattgatgtccatcacggtgat
ggtgtcgaagaagcattttatacaactgatagagttatgacagtttcattccacaaacat
ggcaaatattttcctggtactggagatctcggagatattggtgctgaagaaggaaagtac
tatgcagttaacattcccttaagagatggaatggatgatgatagttatgaatcaatattc
gtaccaataattactaaagtaatggagacattccaacctagtgcagttgtattacaatgt
ggagcggattcacttacaggagacaagcttggatgctttaatctaactgttaaaggtcat
ggcaaatgtgttgaatttgtaaaacgttatgggttaccctttcttatggtcggcggaggt
ggttacactattcgaaatgtatctcgatgttggacatatgaaacagctgtggccttagga
gctgaaattgctaatgaattgccgaataatgactattatgaatattttgggcccgatttt
aaacttcatatcagcccttcgaatatgattaatagaaatgcttcagagtatttagaaaaa
attaaaaaccgactctttgaaaacttacgaatgctacctcacgccccaggagttcaagtg
caagctatccccgaagacggagtacacaatgagtcagacgatgaagataatgttaaccca
gatgagaggaatcctcaatctattacagataaaaaaatttcacctgataatgaatttagc
gatagtgaagatgaaggcatggctcctggtgtagggggtggtggccgaaaagataataga
tcttataaagctgtcacacctgctagaaaacaagcatgtttggactcgaataggatagaa
gtcaatgaaccaaaatttgatattctaaaagatgataaagaagacaaatctgatgattct
aataaaaatgatgctgtcaagtcatga

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