Rhopalosiphum maidis (corn leaf aphid): 113556803
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Entry
113556803 CDS
T06065
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113556803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmd03009
]
113556803
Ribosome biogenesis [BR:
rmd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113556803
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Utp12
NBCH_WD40
PALB2_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
113556803
NCBI-ProteinID:
XP_026817762
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All DBs
Position
3:complement(29980390..29984833)
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AA seq
924 aa
AA seq
DB search
MGITKQYLRYVPFKNFNIVCHPDCNIVFVTLNGISDRYVAVGACENVIIWDLRLEKLVMT
IEDEDMKNNTSKKISVVKLATTPEGKHIAVGYSDGLVNTFALATGELIGTFQGHRSAITA
LTYDTHGHMLASGSKDTEAVIWDVIAEKGLHRLSGHKGVVTGVKFINKHNLVVTSSKDTY
IKFWDLITGHCFKTLAGHVTEVWTLSVLRDDDFVVAGSNDAELRTWKISKANDEESEIKM
SELLSSDNLLDFASSIKCEKSGSLMREGPGRVVSSATDNTNHVLCVHGHGKLLELFIFSV
DSEALERLRNRQRKFRKKASKRGENDEDIAFLNEKNPALQDVVRRLPPILTDYKIKSVDL
VVNQTHVKVVVSMADNTLAFYSVSLAVGKEVKLIRKISLHGHRSNVRVLAFSSDNLAIFT
GGSESVKMWNKKTLNCIRTVETSSPVQCLCVLPGDRHILVGLEDGKLLVIDIAAGDIIES
ISAHVKDLKSIYMLPDELGCVTGGGDSTVKLWQLELVTLPNSDRKVLSLLHLKTLELDEN
VQCSRVSPDNKLLAVALLDNTVKIFFMDTFKHFIDLYGHTLPVNDMDISYDSSIIITASA
DKTIRIWGLDYGDCHRRLTTESTLTSIKFIPKTHQFFTTDKNGNIKHWDADVFERVLTLQ
GHRGECQNMSVSGNGYYIASCGQDNVIRLYEKTEEPLVLEDEREEERTQEDEKELATGEE
TNVYGGPSVLALPTKKTISSEKAAELLLECLNVIKEYKDNILENENKGIEKPSLPIIMTA
FNVKSTDDYLLEIIKRIRSSELEEVLLLMPFSSVCYFMEALIPLLNHMHHGIEPVVRSLI
FLVQTLHKPITSVKDMMPILRQLNVLATKKTNEFRDLVGENLHSLMFINNSQEEEELVFN
ITQNVQKKRKRQKQKLLKTVIVNI
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgggtataaccaagcaatacttgcgttatgttccattcaaaaatttcaatattgtttgc
catcctgactgtaacatagtctttgttacgttgaacggtatctctgacagatatgtagct
gttggtgcttgtgaaaatgttataatttgggatttgcgtttagaaaaattggttatgaca
attgaagatgaagacatgaaaaataatacatcgaaaaagatttctgttgttaagttggcc
actactccagaaggtaaacatattgctgtaggttattctgatggtttggtgaatacgttt
gctttggcgactggtgaactaattggaacattccaaggtcatcgttctgccattactgca
ctaacttatgacactcatggtcacatgctcgcttcaggttccaaagatactgaagcagta
atttgggatgtcatagcagaaaaaggattacatagattgtctggtcataaaggtgtggtt
acaggagttaaatttattaataagcacaatcttgtggtgacatcatcaaaggatacttat
attaagttttgggatttaataactgggcactgtttcaagacattagcaggtcatgtaact
gaagtatggaccttgtctgttttgcgcgatgatgattttgttgttgctggcagcaatgac
gcagaactacgtacttggaagatatcaaaagcaaatgatgaagaatcagagattaaaatg
tctgagcttttgtcttcagataacttgttagattttgcttcttcaataaaatgtgaaaaa
agtggatctttaatgagagaaggtcctggccgtgttgtttcttcagctacagataataca
aatcatgttctttgtgttcatggacatggtaaattgctggaactatttatttttagtgta
gatagtgaagcattagaacgtttgcgtaatcgtcaacgaaaattcagaaaaaaagcttca
aagcgcggtgagaatgatgaagatatagcatttttaaatgaaaaaaatcctgcattacag
gatgttgttcgacgtttacctcctattttaactgactacaaaattaaatcggttgatttg
gtagtaaatcaaacccatgtcaaagttgttgtgagtatggcagataacactttagctttt
tattctgtgtcattagcagttggtaaagaagtaaaattaattcgaaagatttctttacat
ggccatagatccaatgtaagagttttagcatttagttcagacaatttagctatattcact
ggaggctcagagtctgtaaagatgtggaacaaaaaaactcttaattgcattcgaactgta
gagacatctagccctgttcagtgtttatgtgtgcttcctggcgacaggcacattttagtt
ggtcttgaagatggtaaattgttagtaattgacatagctgcaggagatattattgaaagc
atttctgctcatgtaaaagatttaaagtcaatttatatgttaccagatgagttgggttgt
gttacgggtggtggtgacagtacagttaaactatggcaattggaattagtaactttgcca
aattctgatcgaaaagttttatcattattacacttaaagacattagagttagatgaaaat
gtacagtgctcaagagtaagcccagataacaaattattagcagttgctcttttggataac
actgtcaaaatattttttatggatacatttaagcactttattgatctttatggacacaca
ttaccagttaatgatatggacataagttatgattcatcaattattataaccgcaagtgct
gataagacaatcagaatttggggcttggattatggtgactgtcataggcgtctaactaca
gagtctacattgaccagtattaaatttattcctaagacccatcaatttttcactaccgat
aagaatggaaacattaaacattgggatgctgatgtctttgaaagagtcttgacacttcaa
ggtcatagaggggaatgccaaaatatgtctgtgagtggaaatggttattatattgcgagt
tgtgggcaagacaatgtcatacgcttgtatgagaaaaccgaagagcctcttgtattagaa
gacgaacgggaagaagaaagaacacaagaggatgaaaaagaattagccacaggcgaagaa
acaaatgtgtacggaggaccatctgttcttgcattgccgacaaaaaagaccatttcatct
gaaaaagctgctgaattattattggagtgtttaaatgtaatcaaggaatacaaagataac
atattagaaaatgaaaataaaggtatagagaaaccgtcattacctataataatgactgct
tttaatgttaaaagcactgacgattatttgttagaaattattaaaagaatacgctcaagt
gagttagaagaggttttattactcatgcctttttcaagtgtatgttattttatggaagcg
ttaataccattgttaaatcatatgcaccatggaattgagccagttgtccggtcactcata
ttcttagtacaaacattgcacaaaccaataacatctgtcaaagatatgatgcctattcta
aggcaattaaatgtactcgctacaaagaaaacaaatgaatttagagatttagtgggagaa
aatttacattcgttgatgtttataaacaatagccaagaagaagaagaattggtattcaac
attacacaaaatgttcaaaagaaaagaaaacgacaaaagcaaaagctgttaaaaactgtt
attgtcaatatttaa
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