Cupriavidus metallidurans: Rmet_4942
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Entry
Rmet_4942 CDS
T00351
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00250
Alanine, aspartate and glutamate metabolism
rme00310
Lysine degradation
rme00350
Tyrosine metabolism
rme00650
Butanoate metabolism
rme00760
Nicotinate and nicotinamide metabolism
rme01100
Metabolic pathways
rme01120
Microbial metabolism in diverse environments
Module
rme_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rmet_4942 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Rmet_4942 (gabD)
00310 Lysine degradation
Rmet_4942 (gabD)
00350 Tyrosine metabolism
Rmet_4942 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Rmet_4942 (gabD)
Enzymes [BR:
rme01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Rmet_4942 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Rmet_4942 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Rmet_4942 (gabD)
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Motif
Pfam:
Aldedh
AcnX_swivel_put
Motif
Other DBs
NCBI-ProteinID:
ABF11804
UniProt:
Q1LDH2
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All DBs
Position
megaplasmid:1607058..1608506
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AA seq
482 aa
AA seq
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MQLKDPSLFKQLAYVDGQWISADSGATFDVTDPATGEVIARVADLGAAETTRAVAAAEVA
QKAWAAKTGKERANILRRWFDLMLANTDDLAYLMTREQGKPLAEAKGEIAYAASFIEWFA
EEAKRVDGEVLATPAADKRLVTLRQPVGVCAAITPWNFPAAMITRKVAPALAAGCAIVIK
PAELTPLSAFALAELAHRAGVPAGVLQVVTGDARNIGGVLTASPIVRKLSFTGSTEVGRI
LMAQSAPTIKRLSLELGGNAPFIVFDDADVDAAVEGAIVAKYRNGGQTCVCANRFYIQDG
IYDAFAAKFAERTAQLRVGNGLEAGVVIGPLIEDAAIEKVNSLVEDATSKGGKVLAGGGK
HPLGGTYYTPTVIGNATADMRMAREEIFGPVAPLFRFKQDDEAVAAANATEYGLAAYLYT
RDISRAWRTAEALEYGMVGLNTGLISNEVAPFGGIKQSGVGREGSRHGIEEYLEIKYLCL
QM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaaggacccttcgctgttcaagcaactggcctatgtcgacggtcaatggatc
agcgccgattcgggcgccacgttcgacgtcacggacccggccactggcgaggtcatcgcc
cgggtggccgacctgggtgctgccgagaccacgcgcgccgttgctgccgcggaagtcgcc
cagaaagcctgggcggcaaagaccggcaaggagcgcgccaatatcctgcgccgctggttc
gacctgatgttggccaataccgacgacctggcctacctgatgacgcgcgagcaaggcaag
ccgctggccgaggccaagggcgagatcgcctacgccgccagcttcatcgagtggttcgcc
gaggaagccaagcgcgtggacggtgaagtgctggccacgcctgccgccgacaagcggctg
gtcacgctgcgccagccggtaggtgtgtgcgccgcgatcaccccgtggaacttcccggcc
gcgatgattacgcgcaaggtggcgccggcgctggccgctggctgcgcgatcgtgatcaag
ccggccgaactgacgccgctgtccgcattcgcgctggccgaactcgcgcatcgcgccggc
gtgccggcaggcgtgctgcaagttgtcaccggtgacgcccggaacattggtggcgtgctg
acggccagcccgatcgtgcgcaagctgtcgttcacgggctcgacggaagtgggccgcatc
ctgatggctcagtcggcgccgaccatcaagcgcctgtcgctcgaactcggtggcaatgcg
ccgttcatcgtctttgacgatgccgacgtcgatgcggccgtggaaggcgcgatcgtcgcc
aagtaccgcaacggcggccagacctgcgtgtgcgcgaaccgcttctacatccaggacggc
atttacgatgcgttcgccgctaagtttgccgagcgcaccgctcagctgcgtgtcggcaac
gggctcgaggcaggcgtggtgatcggcccgctgatcgaggacgccgcgatcgagaaggtg
aattcgctggtcgaggatgccacgtcaaagggcggcaaggtactggccggtggcggcaag
cacccgctcggcggaacgtattacacgccgaccgtgatcggcaatgccaccgccgacatg
cgcatggcgcgcgaagaaatcttcgggccggtggcaccgctgttccgcttcaagcaggac
gacgaagccgttgccgccgccaacgccaccgagtatggcctggccgcctatctctacacc
cgcgacatctcgcgcgcatggcgcaccgccgaggcgctggagtacggcatggtcggcctg
aacacgggcctgatctccaacgaggtggcaccgttcggcggcatcaagcaatccggcgtc
ggccgcgaaggctcgcgccacggcatcgaggaatacctcgagatcaagtatctttgcctg
cagatgtga
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