Rossellomorea marisflavi: D5E69_15455
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Entry
D5E69_15455 CDS
T07410
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rmf
Rossellomorea marisflavi
Pathway
rmf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D5E69_15455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmf03400
]
D5E69_15455
Enzymes [BR:
rmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D5E69_15455
DNA repair and recombination proteins [BR:
rmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D5E69_15455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_22
AAA_12
AAA_16
nSTAND3
T2SSE
UvrD_C
NTPase_1
AAA_28
AAA
HHH_3
AAA_29
AAA_17
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QHA37068
LinkDB
All DBs
Position
complement(2956649..2959018)
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AA seq
789 aa
AA seq
DB search
MSQQDSLQLFGDEELYVKGRHLVTIFHNEDNMYSVVRIRVEETNDEDYSDKEAVVTGHFP
KLHEDETYSFFGRFQDHPKFGTQFHADHFKKEIPQSKQGIVHYLSSDLFSGIGTKTAEKI
VEHVGENAITKILENPSVLDEVPKLPKEKAKTIFDTLSEHQGLERVMIMLNDFGFGPQIS
MKIYQAYKEQALEIIHNNPYKLVEDIEGIGFNRADELGSKIGITGSHPDRIKAGCLYTLE
QMCVKQGHVYLEAEELIVSVKELLEKSQSERIEFEEISAQVVALEEEGKVAGEGTKIYTP
SLYFSEKGIVSNIERILAQTDYEDQFPQSEFLLSLGSLEDRLGVQYAPSQREAIQTALMS
PMLLLTGGPGTGKTTVINGIVELYADLHGCSLDPKEYKDEPFPVLLAAPTGRAAKRMTES
TGLPAMTIHRLLGWNGKEGFQTDEERTIEGKLLIVDEVSMVDTWLAHQLLKALPENIQVI
FVGDEDQLPSVGPGQVLKDLLESGRVPTVRLTDIYRQEEGSSIIDLAHQMKDGRLPHDLV
KQQKDRSFFPCRTNQIAEVVQKVVENAKKKGFTPKDIQVLAPMYRGPAGIDRLNVLLQEI
FNKNDGTRKEIAFGDVKYRIGDKVLQLVNQPENNVFNGDIGEVVSIFYAKENTEKQDMVI
VSYEGTEVTYTRQDLGQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITR
SKQFLILCGEEDAFRMGVEREEDIIRKTTLKERLQSMEDIVPADEAPFDLMNVDPMIGME
GITPYDFMT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagcaagactctttacaattatttggagacgaagaactgtatgtcaaaggacgc
catcttgtcacgattttccacaatgaagataatatgtacagcgtcgtgcgcatcagggtg
gaagagaccaatgatgaggactacagtgataaagaagccgtggtcacgggccatttcccg
aagcttcatgaagatgagacctattcgtttttcggtcgattccaggatcacccgaagttc
ggcacgcagtttcatgccgatcacttcaagaaggagatcccccaatcgaagcaggggatc
gtccactatctatcgagtgatctgttcagtggaatcgggacgaagacggctgaaaagatt
gtagaacacgtcggggagaatgccatcaccaaaatcctcgagaatccatcggtcctcgat
gaggtgccgaagcttccaaaggaaaaggccaagaccatctttgatacattatccgagcat
cagggtcttgagcgggtcatgatcatgctgaacgatttcggattcggtccccagatctcc
atgaagatctatcaggcctacaaagagcaggcacttgagatcatccacaacaatccatat
aaactggtggaggatatcgaagggatcggcttcaatcgtgccgatgaactgggttcaaag
atcggcatcaccggcagtcatcctgacaggatcaaggcgggctgcttgtatacgttggag
cagatgtgtgtgaagcagggtcatgtgtacctcgaggcggaagaacttattgtaagcgtg
aaggaactgctggaaaagagtcagtccgagcgcatcgaattcgaggagatctctgcccag
gtcgtggcgctggaggaggaagggaaagtggctggagagggaacgaagatttacacccct
tccctttatttctctgaaaagggcatcgtctcgaatatcgaaaggatccttgcccagacc
gactatgaggaccagttcccccaatcggaattcctcctttccctgggatcgttggaggac
cgtttgggcgtgcaatatgccccctcgcagcgcgaagccatccaaacggcactaatgagc
ccgatgctccttttgacgggaggacccggaacggggaaaaccaccgtcatcaacgggatc
gtcgagctgtatgccgatcttcacgggtgctcgctcgatccgaaggagtataaagacgaa
ccgttcccggtgcttcttgctgcaccgacgggaagggccgccaaacggatgacggaatcg
acggggctgcctgccatgaccatccaccggttgctgggctggaatgggaaagaagggttt
cagacggatgaagagcggaccattgaagggaaattgctgatcgtcgatgaagtatcgatg
gtggatacatggcttgcccatcagcttctgaaggcccttcctgaaaacatccaggtgatc
ttcgttggcgatgaggaccagctcccttccgtcggacctggacaggtgctgaaggatcta
ttggaatcgggcagggtgccgacggtgcgattgacggatatttatcgtcaggaagaaggc
tcttccatcatcgaccttgcccatcaaatgaaggacggacgtctgcctcatgaccttgtg
aaacagcaaaaggatcgctctttcttcccttgccgtaccaatcagatcgccgaagtggtt
cagaaagtcgtggaaaacgcgaagaagaagggtttcacacccaaggatattcaggtgctg
gccccgatgtacaggggccctgccggtatcgaccggttgaatgtcctcctccaggaaatc
ttcaacaagaatgatggaaccaggaaggaaatcgccttcggggatgtgaaataccggatc
ggggataaagtgctgcagcttgtcaatcagcccgagaacaatgtcttcaacggggatatc
ggtgaagtggtttcgatcttctacgcaaaggaaaacacagagaagcaggacatggtcatc
gtttcctatgaaggcacggaagtcacctatacgcgtcaggatctcggacagatcacccat
gcctactgctgctccatccataaatcccagggaagtgagtttcccatcgtcatccttccg
gtggtgaagagctattaccgtatgctcaggagaaatcttctatatacggccatcaccaga
agcaaacagttccttatcctgtgcggggaagaggatgcgttccgtatgggggtcgagcgg
gaagaggatatcataaggaaaacgacactgaaggaaaggcttcaatccatggaagacatc
gttccagcagatgaggctcccttcgatctcatgaacgtggaccccatgatcgggatggag
ggcattacgccgtatgacttcatgacgtga
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