Rhodothermus marinus SG0.5JP17-172: Rhom172_0133
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Entry
Rhom172_0133 CDS
T01606
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg00470
D-Amino acid metabolism
rmg00550
Peptidoglycan biosynthesis
rmg01100
Metabolic pathways
rmg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rhom172_0133
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rhom172_0133
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rhom172_0133
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Rhom172_0133
Enzymes [BR:
rmg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rhom172_0133
Peptidoglycan biosynthesis and degradation proteins [BR:
rmg01011
]
Precursor biosynthesis
Amino acid ligase
Rhom172_0133
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
TTL
GARS_A
ATP-grasp_4
CPSase_L_D2
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AEN72082
LinkDB
All DBs
Position
138961..139971
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AA seq
336 aa
AA seq
DB search
MHPNGLMRIGIVYDLFDDYPWEVGEPPDADAENEPPETVDVLAAAIRKLGHRPVRIGTAY
DLLVELPDLRIDCGISIAEGARGRNREAYAPMLFEMAGIPYIGSDPLTLSLSLDKAWTKD
LVAAAGVPTPPYRTYAGPEAIDPHDLPGPFPLFVKPRYEGSSKGITAASKVHSLEALREQ
VARLTATYRQEVIVEPFIEGSEFTVAVIGNNPPEPLPVLQRAVEATTGIGLHALEHRGMK
PAAALEAAPYVPLTDELERCLQQLAVRVYEKLQCRDFARLDFRVDREGKPWFLEINPLPT
FAPDGTFAILAELMQRPYVDFLAEILQRGLRRLGLA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccaacgggctcatgcggatcggtatcgtctacgatctgttcgacgactatccc
tgggaggtcggcgagccgccggacgccgacgccgaaaacgagccgccggagacggtcgat
gtgctggcggcggccatccgcaaactgggacacaggcccgtccggatcggtacggcttac
gatctgctggtcgaactaccggatctgcggatcgactgtggcatcagcatcgccgaaggg
gcccgtggccgcaaccgcgaagcctacgcgcccatgctgttcgaaatggccgggatcccc
tacatcggctccgatccgctgacgctctcgctcagcctcgacaaggcctggaccaaagat
ctggtcgcggccgccggggtgcccacgccgccgtaccggacctatgccggccccgaggcc
atcgatccgcacgatctgcccgggccgtttccgttgttcgtgaaaccccggtacgaaggc
tcctcgaaggggatcacggccgcctccaaggtgcattcgctggaggcgctgcgcgagcag
gtggcccggctgacggcgacctaccgccaggaggtgattgtggagccgttcatcgaaggg
agcgagtttaccgtggccgtcatcggcaacaatccgcccgaaccgctgccggtgctgcag
cgggcggtggaggccaccacgggcatcgggctgcacgcgctggagcatcgcggcatgaag
ccggcggccgcgctcgaagcggcgccctacgtgccgttgaccgacgagctggagcgctgc
ctgcaacaactggccgtgcgcgtctacgaaaagctccagtgccgcgactttgcccgactg
gacttccgcgtcgatcgcgagggtaagccctggtttctggagatcaacccgctcccgacg
tttgcgccggacggaacgtttgccatccttgcggaattgatgcagcggccctacgtggac
tttctggccgagatcctgcaacgcgggctccggcgtctgggcctggcctga
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