Rickettsia massiliae AZT80: RMB_06475
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Entry
RMB_06475 CDS
T01758
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rmi
Rickettsia massiliae AZT80
Pathway
rmi00470
D-Amino acid metabolism
rmi00550
Peptidoglycan biosynthesis
rmi01100
Metabolic pathways
rmi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rmi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RMB_06475 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RMB_06475 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RMB_06475 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmi01011
]
RMB_06475 (ddl)
Enzymes [BR:
rmi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RMB_06475 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rmi01011
]
Precursor biosynthesis
Amino acid ligase
RMB_06475 (ddl)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AFB32016
UniProt:
H6QK16
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All DBs
Position
complement(1120799..1121770)
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AA seq
323 aa
AA seq
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MHKYKYQTHWVEHSIVKILSSTGKKYIALMAGGMSAEREVSLVSSEGVSKALIELGYRVT
FIDMGADITVRLQEIKPDIVFNCLHGTYGEDGCLPGLLNIMRIPYTHSGMLSSALAFNKI
HSRSWFLTNNINMAESIVVNKSDNIKNDPMKRPYVIKPLTQGSSIGVEVIFAEDDFNFAD
YDFPYGDQVIIEQYIKGRELQVALLNGKALGVLEIQLLKNRFYDYETKYTEGFADHLCPA
PLPANLYEKLLIESEKIYKTMNCKGPARAEFILEEQTNKLYALELNTHPGMTPLSIVPEI
AAYAGINFTNLIEEIIKTASFES
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcataaatataaatatcaaacacattgggtggaacactctatagtcaaaatattaagt
agtaccggtaaaaagtatatagcattaatggcgggcggtatgtctgctgagcgtgaagta
tcgttagtgtcaagcgaaggagtgagtaaagctttaattgaattaggatatagagttacc
tttattgatatgggagcggatattacagttagattacaagaaataaaacctgatatcgtt
tttaattgcctgcacggtacatacggtgaagacggttgtttaccaggattacttaatata
atgcggattccttatactcatagcggcatgttatcttcagctttagcattcaataaaata
cattctaggagctggtttttaacgaataatattaatatggcagaaagcattgttgtaaat
aaaagcgataatataaaaaatgatcctatgaaacgaccgtacgttattaagcctcttacg
caaggctcaagtattggtgttgaggtgatatttgcagaagatgattttaactttgccgat
tatgattttccttacggtgatcaggtaataatagaacaatatataaaagggcgagaattg
caagtagcgttattaaacggcaaagctcttggagttttagagattcaattactaaagaat
cgtttctatgattatgaaactaaatataccgaaggatttgctgatcatctttgtcctgct
ccgctacctgctaatttatatgagaaattacttatagaatcagaaaaaatttataaaaca
atgaattgtaaaggtcctgctagagcagagtttattttagaagagcagacaaacaagtta
tatgctttggagctaaatactcacccaggtatgacacctttatcaatagtgccggaaatt
gcagcttatgcagggataaattttactaacttaattgaagaaattataaagacggcaagc
tttgaatcatga
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