Roseovarius mucosus: ROSMUCSMR3_01093
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Entry
ROSMUCSMR3_01093 CDS
T04779
Symbol
ldc
Name
(GenBank) lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rmm
Roseovarius mucosus
Pathway
rmm00330
Arginine and proline metabolism
rmm00480
Glutathione metabolism
rmm01100
Metabolic pathways
rmm01110
Biosynthesis of secondary metabolites
rmm04148
Efferocytosis
Module
rmm_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ROSMUCSMR3_01093 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ROSMUCSMR3_01093 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ROSMUCSMR3_01093 (ldc)
Enzymes [BR:
rmm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ROSMUCSMR3_01093 (ldc)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARE82588
UniProt:
A0A1V0RLD7
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Position
complement(1111040..1112170)
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AA seq
376 aa
AA seq
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MKNAAPWSDPRAHLMRQTPDAALLYFSPDQLQATAQAFQAGFPGLVTYAVKANPGAEVLA
NLVAAGITAFDVASPEEMRAVRSVCPAAVLHYNNPVRSVPEIEVAAHMGARSYSIDDMRE
LDKLTGRIAPDAEITVRLALPVRGAAYDFGAKFGVGPERAAELLRVVADRGFTPSMTFHP
GTQCADPVAWGAYIGVVAEVARSAGVRLARLNVGGGFASHRTGTMPNLGAIFTHIGAEVA
RVFGADAPALVCEPGRAMVAEAFSLAVRVKALRETGAIFVNDGVYGGLTEIRDIGAPDRI
TVLAPDGTPRTGAPHPRVVFGPTCDSIDRLPDPLPLPGDLAEGDYLLIAGMGAYTRCLST
DFNGYGLRDVVTVAHL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgccgccccttggtccgatccgcgcgcgcatctgatgcgccaaacccccgat
gcggcgttgctctatttctcgcccgaccaattgcaagccaccgcacaggcctttcaggcc
gggtttccgggccttgtgacctatgcggtcaaggccaatccgggggccgaggtgctggcc
aatctggtggcggcgggcatcaccgcctttgacgtggccagccccgaggaaatgcgcgcc
gtgcgcagcgtttgcccggctgccgtgctgcattacaacaaccccgtgcgctctgtcccc
gagatcgaggtcgcggcgcacatgggcgcgcggtcctattccatcgacgacatgcgcgaa
ttggacaagctgacggggcggattgcaccggatgccgaaatcaccgtgcggcttgccctg
ccggtgcggggggctgcctatgatttcggggccaagttcggcgtcgggccagagcgcgcg
gcagagttgctgcgcgtggtcgcagaccgtggctttaccccgtcaatgacctttcatccc
ggcacgcaatgcgccgacccggtcgcatggggcgcttatatcggcgttgtggccgaggtg
gcgcgcagcgctggcgtgcgtctcgcgcggctcaatgtgggcggcggctttgcgtcgcat
cgcaccgggaccatgccgaaccttggcgcaatcttcacccatatcggggccgaggtcgcc
cgcgtctttggcgcggatgccccggcgctggtgtgcgaaccgggccgcgccatggtggcc
gaggcgttcagccttgccgtgcgcgtcaaggcgctgcgcgagaccggcgcgattttcgtc
aacgatggcgtctacggcggcctcaccgaaatccgcgacatcggcgcgcccgaccggatc
accgttctggcccccgacggcacgccgcgcaccggcgcgccgcacccgcgcgtggtcttt
ggccccacctgcgacagcattgaccggctgcccgatcccttgcccctgcccggtgatctg
gccgagggcgattatctgctcatcgcaggcatgggcgcctatacccgctgcctcagtacc
gatttcaacggctacggcctgcgcgacgttgtgaccgtggcgcatctgtaa
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