Roseovarius mucosus: ROSMUCSMR3_03947
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Entry
ROSMUCSMR3_03947 CDS
T04779
Name
(GenBank) putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rmm
Roseovarius mucosus
Pathway
rmm00630
Glyoxylate and dicarboxylate metabolism
rmm00680
Methane metabolism
rmm01100
Metabolic pathways
rmm01120
Microbial metabolism in diverse environments
rmm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROSMUCSMR3_03947
09102 Energy metabolism
00680 Methane metabolism
ROSMUCSMR3_03947
Enzymes [BR:
rmm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
ROSMUCSMR3_03947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_8
Fer4_6
Fer4_2
Fer4_21
TetR_C_34
Fer4_17
Fer4_16
Fer4_4
Fer4_18
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
ARE85393
UniProt:
A0A1V0RUE0
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All DBs
Position
4083060..4085954
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AA seq
964 aa
AA seq
DB search
MKDFIIPKDRDMGTPAKVGAPVTLEIDGVAVTVPEGTSVLRAAAEAGISIPKLCASDNLE
AFGSCRLCVVEIEGRRGTPASCTTPVTPGMVVHTGSSKVRKIRKGVMELYISDHPLDCLT
CSANGDCELQDMAGAVGLRDVRYEAPKDGGMVNHFEARNTSGEANPEWLPKDDSNPYFSY
DPSKCIVCNRCVRACEEVQGTFALTIQGRGFDSRVSAGNADDDFLASDCVSCGACVQACP
TATLQEKSIIELGTPDRSVVTTCAYCGVGCSFKAEMNGDTLVRMVPYKHGKANRGHSCVK
GRFAYGYAHHNDRILKPMIRERITDPWQEVSWDEALSFAATRLRSLQAQYGKKSIGVITS
SRCTNEETYLVQKLARAVFGNNNTDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEHTDV
VVVIGANPTDGHPVFASRLKKRLRAGAKLIVIDPRRIDLVKSPHISAAHHLPLRPGTNVA
VVSALAHVIVTEGLMDEDFIRARCDWDEFQHYAEFISNPRHSPEATAMLTGVDPAELRAA
ARLFAHGGNGAIYYGLGVTEHSQGSTTVMGIANLAMLTGNIGRPGVGVNPLRGQNNVQGS
CDMGSFPHELPGYRHVKGPEVRAVFEEAWGVEIDAEPGLRIPNMLDAAVDGTFKGLYCQG
EDILQSDPDTKHVAAGLAAMDCVIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRI
NRVRKVIPPLNGYADWEITQMLANAMGAGWTYSHPARIMEEIAATTPSFAGVDYALLEEK
GSVQWPCNEAHPEGTPLMHVDGFMRGKGRFIVTEYVATDEKTGPRFPLLLTTGRILSQYN
VGAQTRRTANVVWHEEDLLEIHPHDAEVRGLKEGDWVRLASRAGETTLRAMLTDRVSPGV
VYTTFHHPDTQANVITTDYSDWATNCPEYKVTAVQVSLSNGPSDWQEDYAAQAAQARRIL
PAAE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttcattattcccaaagaccgcgacatgggcacgcccgccaaagtgggagcc
ccggtgacgttggagatcgacggtgttgccgtaacggtgcccgagggcacatcggtgttg
cgcgcagcggccgaggcggggatttccatccccaagctctgcgcctctgataatcttgaa
gcctttggttcttgccgcctctgtgtggtggaaatcgaggggcggcgtggcacacctgcg
tcctgcaccacgcctgtgacgccgggcatggtggtgcataccggatcgtcaaaggtgcgc
aagatccgcaaaggggtgatggagctctatatctctgatcaccctctcgattgcctgact
tgctctgccaatggcgattgcgagttgcaggatatggccggtgcggtcgggctgcgtgat
gtgcgctacgaggcccccaaggatggcggcatggtcaaccatttcgaggctcggaacacg
agcggcgaggccaatccggaatggttgccgaaagacgacagtaacccgtatttcagctat
gaccccagcaaatgcatcgtctgtaaccgctgtgtgcgtgcctgcgaagaagtgcagggc
acatttgccctgaccattcagggccgtggctttgacagccgcgtatcggcgggtaatgcg
gatgatgatttcctcgcctctgactgtgtgagttgcggggcctgcgtgcaggcctgcccg
acggcgactttgcaggagaaatccatcatcgagctgggcacgcctgatcgctcggttgtc
acgacctgtgcctattgcggcgttggctgttcgttcaaggccgagatgaacggcgacacg
ctggtgcgtatggtgccatataaacacggcaaggccaatcgcgggcattcctgcgtcaaa
gggcgatttgcctatgggtatgcccatcacaacgaccgcatcctaaagcctatgatccgc
gagcggattactgatccctggcaagaggtcagttgggacgaggcgctcagctttgcagcc
acccgtctgcgcagcttgcaggcacaatatggcaagaaatctatcggcgtgattacctca
agccgctgcaccaacgaagaaacctatctggtgcagaaactggcgcgcgcagtctttggt
aacaacaataccgacacctgcgcgcgcgtttgtcattcccctacaggatatggcttgggc
cagacgtttggcacctctgccggcacgcaggatttcgactctgtcgaacataccgatgtg
gtggtggtgatcggtgccaatccgaccgatgggcacccggtttttgcaagccgcctcaaa
aagcggttgcgtgctggtgccaagctgatcgtgattgacccgcgccggattgaccttgtg
aaatcaccgcatatttcggcagcgcatcacctgccgcttcgccccggcaccaatgtggcg
gtggtcagcgcgcttgcgcatgtgatcgtgaccgaggggctgatggatgaggacttcatc
cgcgcgcggtgtgattgggatgaatttcagcattacgccgaattcatcagcaacccgcgc
cattcgccagaagcgacagcgatgttgaccggggtcgaccctgcggaactgcgcgccgcg
gcccggcttttcgcgcatggtgggaacggggcgatttactatggtcttggcgtaaccgaa
cattcccaagggtcgaccacggtcatgggcattgccaacctcgcgatgctgactggcaat
atcgggcggcccggcgtgggcgtgaacccgttgcgcgggcaaaacaacgtgcagggctct
tgcgacatggggtctttcccgcatgaattgcccggctatcgccatgtcaaagggccagaa
gtgcgcgcagtctttgaagaggcttggggcgtagagattgacgccgagccgggtttgcgc
attcccaacatgctcgatgctgccgtcgatgggacgttcaaggggctgtattgccaaggc
gaggatatcctgcaatcggaccccgacaccaagcatgtggcggcgggtctggctgcgatg
gactgtgtcatcgtgcatgacctcttcctcaacgagaccgccaattacgcgcatgtcttc
ctgcccggttcgaccttcttggagaaagacggaaccttcaccaatgccgagcgccgcatc
aaccgcgtgcgcaaggtgatcccgccactcaacggctatgcggattgggaaattacccag
atgcttgcaaacgccatgggggcagggtggacgtatagccacccggcgcggatcatggag
gaaatcgctgcaacgacgccaagctttgccggggtcgactatgccctgctggaggaaaag
ggcagcgttcaatggccctgtaacgaagcacatccagagggcacgccgctgatgcatgtg
gatgggttcatgcgcggcaaggggcggttcatcgtcaccgaatatgtggcgactgatgag
aaaaccggcccacggttcccgctgttgctgaccaccgggcgcatcctcagtcagtataac
gtcggcgcgcagacacggcgcaccgcgaatgtggtctggcacgaagaggatctcttggaa
atccatccgcatgatgccgaggtgcggggtttgaaagagggcgattgggttcgattggcc
agtcgcgcaggcgaaaccaccctacgggccatgctgacagatcgcgtcagccccggcgtg
gtctacaccacctttcaccatccggatacgcaggccaatgtcataaccaccgattactcg
gactgggccaccaactgtccggagtacaaggtgacagcggttcaggtcagcctgtcgaac
gggccaagtgactggcaagaagattacgccgcgcaggccgcacaggcgcggcgcatcctg
cctgcggcggagtga
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