Ralstonia mannitolilytica: TK49_16885
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Entry
TK49_16885 CDS
T03778
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rmn
Ralstonia mannitolilytica
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmn03000
]
TK49_16885
Transcription factors [BR:
rmn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TK49_16885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
HTH_28
SBP_bac_11
PBP_like
HTH_Tnp_ISL3
HTH_AsnC-type
MarR
HTH_24
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AJW46453
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Position
2:72223..73158
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AA seq
311 aa
AA seq
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MLGDLLMSFFEVARQGSVTAAAKQLRLSQPTVTGRIRQLEEMYGVELFHRRGSRLDLSDL
GVSLMPIVERLAQQEGDVDFLLRNAGDLRTGNLRVGATGPYYILPSVAAFRTRHPTIEIT
IEFGNSQQMLEALSEVRIDLAVSSHAVDDERLHRITLAEDAMVLAVPADDPLARCSHVAL
ADIACCQLLMREPGSITRRVTEEALAAAGVEPAGMSIIGSREAIYEAISLGLGCSIVPAR
EAPRRPDVRVLPFAAHAPVIHEYLYFLKERKDARLVRAFLDCLTPLHAHAPRKKTDALIA
KVMAMDTAATR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgatctgttgatgtcgttctttgaagtggcccgccagggcagcgtcacggcg
gccgccaagcaattgcgcctgtcgcagccgacggtgaccgggcgcatccgccagctggaa
gagatgtacggcgtcgagctgttccaccgccgcggtagccggctcgacctgtcagacctc
ggcgtgagcctcatgcccatcgtcgagcggcttgcccagcaggaaggcgacgtggacttc
ctcctgcgcaacgctggcgacctgcgcaccggcaacctgcgcgtgggcgccaccggcccc
tactacatcctgccaagcgtggcggccttccgcacccgtcacccgaccatcgagatcacc
atcgagttcggcaactcgcagcagatgctcgaggcgctctcggaggtccgcatcgacctg
gccgtctcgtcgcacgccgtggacgacgagcggctgcaccgcatcacgctggccgaagac
gccatggtactggccgtgccggcggacgacccgctggcgcggtgctcccacgtggcgctc
gccgacatcgcctgctgccagctgctgatgcgcgagccgggctcgatcacccgccgcgtg
accgaagaggcgttggccgccgccggtgtcgagccggcgggcatgagcatcatcggcagc
cgcgaggcgatctacgaggcgatcagcctcggcctcggatgcagcatcgttcccgcgcgc
gaggcgccacgccggcccgacgtgcgcgtgctgccctttgccgcgcacgcgcccgtcatc
catgagtacctgtacttcctgaaggagcgcaaggatgcgcggctcgtgcgcgcgttcctc
gattgcctgaccccgctgcacgcacacgccccccggaaaaagaccgatgcgctcatcgcc
aaagttatggcgatggacacggccgcgacgcgctag
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