Ralstonia mannitolilytica: TK49_19035
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Entry
TK49_19035 CDS
T03778
Name
(GenBank) LysR family transcriptional regulator
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
rmn
Ralstonia mannitolilytica
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmn03000
]
TK49_19035
Transcription factors [BR:
rmn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TK49_19035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_AsnC-type
HTH_24
DUF2089
HTH_10
MarR_2
MarR
HTH_IclR
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
AJW46821
LinkDB
All DBs
Position
2:519453..520364
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AA seq
303 aa
AA seq
DB search
MDRVSDLEFFTRLVKQGSLAALARELGVTPPAVTARLAQLERRLGVRLLNRTTRRLSVTH
EGEIYLATGSRLLEELEALEQAVSSSRGTPKGLLRVNATFGFGRRHIAPAVVEFARRYPE
VEVQLELTDRSVNLADKAFDIGIWFGTVPDSRMVARKIVSNRRLLCASPEYLARAGAPQV
PRDLQSHACIVLRESDAAYGTWYLTRGSKHETVKVRGPLSTNDGETGVLWALAGYGILMR
SEWDIHAHVRDGRLVPVLTDWTLPVADVFAVYPERANLSAKVSAFIDFLSEWFQRDAGWA
DRR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgtgtccgatctcgagttctttacccggctggtcaagcagggctccctggcg
gcgttggcgcgcgagttgggcgtgacaccgccggccgtgacggcgcggctggcgcaactg
gaaaggcgcctcggcgtgcgcctgctcaaccgcaccacgcggcgcctgagcgtcacgcat
gaaggcgagatctacctggccaccggctcgcggctgctggaagaactcgaggcgctggag
caggcggtctccagcagccgcggcacaccgaagggcctgttgcgggtgaatgccacgttc
ggcttcgggcgccggcatatcgcgccggccgtcgtcgagttcgcccggcgttatcccgag
gtggaggtgcaactggagctgacagaccgctccgtcaacctggccgacaaggccttcgac
atcggcatctggttcggcacggtccccgattcgcgcatggtggcgcgcaagatcgtcagc
aatcgccggctgctgtgcgcgtcgcccgaatatctcgcacgcgcgggcgcgccccaggtg
ccgcgcgatctgcaatcgcatgcgtgcatcgtgctgcgcgagagcgatgccgcctacggc
acgtggtacctcacacgcggcagcaagcatgaaaccgtcaaggtgcgcgggccgctgagc
accaacgacggcgagaccggcgtgctgtgggcgctggccggctacggcatcctcatgcgc
tcggagtgggacatccacgcccacgtgcgcgacggccggctggtgcccgtgctgaccgat
tggacgctgcccgtggccgatgttttcgcggtgtatccggagcgcgcgaacctgtcggcc
aaagtcagcgcgttcatcgatttcctctcggagtggttccagcgcgacgccggctgggcc
gaccgccgctga
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