Rhodothermus marinus DSM 4252: Rmar_0135
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Entry
Rmar_0135 CDS
T01119
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00470
D-Amino acid metabolism
rmr00550
Peptidoglycan biosynthesis
rmr01100
Metabolic pathways
rmr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rmar_0135
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmar_0135
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rmar_0135
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Rmar_0135
Enzymes [BR:
rmr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rmar_0135
Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Precursor biosynthesis
Amino acid ligase
Rmar_0135
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
TTL
GARS_A
ATP-grasp_4
CPSase_L_D2
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ACY47043
UniProt:
D0MCT3
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All DBs
Position
145023..146033
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AA seq
336 aa
AA seq
DB search
MHPNGLMRIGIVYDLFDDYPWEVGEPPDADAENEPPETVDVLAAAIRKLGHKPVRIGTAY
DLLVELPDLRIDCGISIAEGARGRNREAYAPMLFEMAGIPYIGSDPLTLSLSLDKAWTKD
LVAAAGVPTPPYRTYAGPEDVDPHDLPGPFPLFVKPRYEGSSKGITAASKVHSLEALREQ
VARLTATYRQEVIVEPFIEGSEFTVAVIGNNPPEPLPVLQRAVEATTGIGLHALEHRGMK
PAAALEAAPYVPLTDELERCLQQLAVRVYEKLQCRDFARLDFRVDREGKPWFLEINPLPT
FAPDGTFAILAELMQRPYVEFLAEILQRGLRRLGLA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccaacgggctcatgcggatcggtatcgtctacgatctgttcgacgactatccc
tgggaggtcggcgagccgccggacgccgacgccgaaaacgagccgccggagacggtcgat
gtgctggcggcggccattcgcaagctggggcacaagcccgtccggatcggtacagcctac
gatctgctggtcgaactgccggacctgcggatcgactgtggcatcagcatcgctgaaggg
gctcgtggccgcaaccgcgaagcctacgcgcccatgctgttcgaaatggccgggatcccc
tacatcggctccgatccgctgacgctttcgctcagcctcgacaaagcctggaccaaagat
ctggtcgcggccgccggggtacccacgccgccataccggacctatgccggccctgaggat
gtcgatccacacgatctgccgggaccgtttccgctgtttgtaaaaccccggtacgaaggc
tcctcgaaggggatcacggccgcctccaaggttcattcgctggaggcgctgcgcgagcag
gtggcccggctgacggcgacctaccgccaggaggtgatcgtggaaccgttcatcgaaggg
agcgagtttactgtggccgtcatcggcaacaatccgcccgaaccgctgccggtgctgcag
cgggcggtggaggccaccacgggcatcggcttgcatgcgctggagcatcgcggcatgaag
ccggcggccgcgctcgaagcggcaccttacgtgccgctgaccgacgaactggagcgctgc
ctgcagcaactggccgtgcgcgtctacgaaaagctccagtgccgcgactttgcccgactg
gacttccgcgtcgatcgcgagggcaaaccgtggtttctggagatcaatccgctcccgacg
tttgcgccggacggaacgtttgccatccttgcggaattgatgcagcggccctacgtggaa
tttctggccgagatcctgcaacgcgggctccggcgtctgggcctggcctga
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