Rattus norvegicus (rat): 124451
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Entry
124451 CDS
T01003
Symbol
Lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
124451 (Lhx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
124451 (Lhx5)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
124451 (Lhx5)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124451
NCBI-ProteinID:
NP_620605
RGD:
71079
Ensembl:
ENSRNOG00000001392
UniProt:
P61376
A6J1J7
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All DBs
Position
12:complement(41786746..41795183)
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgtgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctctcg
gagaagtgtttctcccgggagggcaagctgtactgtaaaaacgacttcttcaggcgcttt
ggcacaaagtgcgccggctgtgcgcaaggtatctctcccagcgacctggtgcgcaaggcc
cggagcaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
accggagaagaactctacgtgatcgacgagaacaagtttgtgtgcaaggacgactactta
agctcctctagtctcaaagagggaagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtctccggacctccaagatccgttacaggacgaccccaaagagaccgacaactcgacc
tcatcggacaaggagaccgctaacaacgagaatgaggaacagaactccggcaccaaacgg
cgcggcccgcgcactaccatcaaggccaagcagctggagacgctcaaggcagccttcgca
gccacgcccaagcccacgcgccacatccgcgaacagctggcacaagagaccggcctcaac
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgccgcatgaaacag
ctgagcgctctgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccatatacttattatgga
gactaccaaagcgactactacgctccgggaggcaactacgatttcttcgcgcacggcccg
ccgtcgcaggcacagtctccggccgactcaagcttcttggcagcatcgggacctggctcg
acgccgcttggcgcgctggaaccaccgctggctgggcctcacggcgcggacaaccctagg
ttcaccgacatgatctcgcacccggacacgcccagtccggagccaggcttgcccggagcg
ctgcaccccatgccgggagaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcaccagcggctacagcggacccctgtcgcaccccaatcctgagctcaacgaagcggcc
gtatggtaa
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