Rattus norvegicus (rat): 291171
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Entry
291171 CDS
T01003
Symbol
Trim27
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
291171 (Trim27)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
291171 (Trim27)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
291171 (Trim27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_4
Baculo_IE-1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
291171
NCBI-ProteinID:
NP_001128446
RGD:
1310105
Ensembl:
ENSRNOG00000055917
UniProt:
A0A0G2K8V4
B5DFI5
LinkDB
All DBs
Position
17:complement(48233999..48246348)
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AA seq
513 aa
AA seq
DB search
MASGSVAESLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPDGEMGVCEKHREPLKLYCEQDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNRLDHLRRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagggagcgtggccgagtccctgcagcaggagaccacctgccccgtgtgtctt
caatactttgtggaacccatgatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcccgctgctggggtgccgcggagactaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgccacatgcggcccaaccggcacctggccaacgtgacccagctggtgaagcaa
ctgcgcaccgagcggccgtcggggccggacggcgagatgggcgtgtgcgagaagcaccgc
gagcctctgaagctgtactgcgagcaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgcgagcaccgtggccacagcgtgctgccgctggaggaggctgtggaaggcttcaag
gagcaaatccagaatcggctggaccacctaagaagagtgaaagacttgaagaagagacgg
agggcacagggggagcaggcacgagctgagctcctgagcctgacccagatggagagggaa
aaaattgtttgggagtttgagcagctgtatcactctttgaaggaacatgagtatcgcctg
ttggctcgccttgaggagctagacttggccatctataatagcatcaacggtgccatcact
cagttctcctgcaacatctcccacctcagtggcctgattgcccaactggaagagaagcag
cagcagcccacgagggagctcttgcaggacattggagacactctgagcagggctgaaaga
atcaggatccctgagccctggatcacacctccagatctacaagagaaaatccatattttt
gcccaaaaatgtctgtttttgacagaaagtctaaaacagttcacagaaaaaatgcagtca
gatatggagaagatccaagagttgagagaggctcaattatactcagttgacgtgaccctg
gacccagacacagcctatcccagcctgattctttcagataatcttcggcaagtacggtac
agttacctccagcaggatcttccagacaaccctgagcggttcaatctgtttccctgtgtc
ttgggctctccatgtttcatcgctgggagacattactgggaggtagaggtgggcgataaa
gccaagtggaccataggtgtctgtgaagactcagtgtgcagaaaaggtggggtgacctca
gccccccagaatggattctgggcagtgtcattgtggtatgggaaagaatattgggctctt
acatccccgatgactgcactccccctgcggacccctctccagagggtagggattttcttg
gactatgatgctggtgaggtttccttctacaatgtgacagagagatgccatacctttact
ttctctcatgctaccttctgtgggccagtccggccctacttcagcctaagttactcggga
gggaagagtgcggctcctttgatcatctgccctatgagtgggattgatgggttttctggc
catgttgggaatcatggtcattccatggagacctctccttga
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integrated database retrieval system