Rattus norvegicus (rat): 303684
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Entry
303684 CDS
T01003
Symbol
Trim65
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM65
KO
K12031
tripartite motif-containing protein 65
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
303684 (Trim65)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
303684 (Trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
DUF5740
APP_E2
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
303684
NCBI-ProteinID:
NP_001129186
RGD:
1559497
Ensembl:
ENSRNOG00000024145
LinkDB
All DBs
Position
10:complement(101847822..101863052)
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AA seq
518 aa
AA seq
DB search
MAVQLLEEDLVTCPICLGRYCDPVTLPCGHTFCGNCIQDSWRCCEKICPECRQPFPEGAK
LSRNVKLSTLLQGLPAAIQRLESGTSQSARCPRHGRPLEFFCLTEGLCVCSACTVHDCSH
HERALLDVERRVREDRLRARVMVTRQQATQAETQLEELQQQSSQIESSARTLASVVSRRF
SSLLQVLEKQQASTLSDIEGAKKRALDQVLHERQRLTDHLKALSQYDQSVQDLLGQGDDF
IFFQGLQQLSEPIGSLGPPTPPQWDEEEQLNSVNQLLSPLCELLLEEKTLPTAADKAASA
GPMEALGPLAPVPSAMCPLRKKLWQNYRNLTFDPETANRYLLLSHKAQQVTHHFQAQSPA
RSGSFELWQVQCTQSFQTGQHYWEVRASDHSITLGVTYPELPRRKLGTHTDNIGRGPYSW
GLCIQEDSIQAWHNGRAQRLSRAGVSGGLLGVDLNLTSGCLTFYSLEPHTQPLHTFYAVF
SRPLFPVFWLLEGRTLSLCHQPEAELPPRPQEEAIAPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcagctgctggaggaggacctggtgacttgtcccatctgcctgggtcgctac
tgcgaccccgtgacgctgccctgcgggcacaccttctgcgggaactgtatccaggattcg
tggcgctgttgcgaaaagatatgccccgaatgtcgccagcctttccccgagggcgccaag
ctgagccgcaacgtgaagctgagcaccttgttgcaggggctgccggccgccatccagcgt
ctggagtccggcacgagccaaagcgctcgctgcccgcgccacgggaggccgctcgagttc
ttctgtctcacggagggcctctgcgtgtgcagcgcgtgcacggtgcacgactgtagccac
cacgagagggcgctgctggacgtggagcgccgcgtgcgcgaggaccgactgagagctagg
gtaatggttacccggcaacaggccactcaggcagagacccagcttgaggagctgcagcag
caaagcagtcagattgagagttcagcccgcaccctggcctcggtggtctccaggagattc
agtagcctgctccaggttctggagaagcagcaggcctcaacactgagtgacatagaggga
gccaagaagcgggcgctggaccaagttctgcatgagagacagcggctgactgaccaccta
aaggccctgtctcagtacgaccaaagtgtccaggacctcctggggcagggggatgatttc
atcttcttccaggggttacagcagctctctgagcccatagggtccctcgggccaccgact
cctccccagtgggatgaggaagagcagttgaacagtgtgaaccagctgcttagcccactg
tgtgagctcctccttgaagagaagaccctccccacggcggcagacaaagctgccagtgct
ggccctatggaggccttgggtcccctggcaccagtccccagcgcaatgtgtccactgagg
aagaagctctggcagaattatcgcaatctgacctttgacccagagactgccaaccggtat
ttgctcttgtctcacaaggcccagcaggtgacacaccatttccaggctcagagcccagcc
aggtcaggcagctttgagctgtggcaggtacagtgcacccagagttttcagactggacaa
cattactgggaggtgcgtgcctctgaccactccatcactctgggcgtcacctacccagag
ctaccacgccgaaagctggggacccacacagataacatcggtcgtggaccctactcgtgg
ggcctctgcatccaggaggacagtattcaggcctggcacaatggcagagctcagcgtctg
agtcgggcaggggtatctggaggactcctgggcgtagatttgaacttgacctctggctgc
ctcaccttctacagcctggagccacacacacagccactgcacactttctatgcagttttc
agccggcctctcttccctgtcttctggctccttgaggggaggacccttagtctttgccat
cagcctgaggccgagctccctccaaggccccaggaagaggccatagcacccagctga
DBGET
integrated database retrieval system
