Rattus norvegicus (rat): 309457
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Entry
309457 CDS
T01003
Symbol
Pcgf6
Name
(RefSeq) polycomb group RING finger protein 6
KO
K11470
polycomb group RING finger protein 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03083
Polycomb repressive complex
rno04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
309457 (Pcgf6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
309457 (Pcgf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
309457 (Pcgf6)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
309457 (Pcgf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
RAWUL
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-RING_6
zf-RING_10
PBP1_TM
TRAF3_RING
zf-C3HC4_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
309457
NCBI-ProteinID:
NP_001013172
RGD:
1306904
Ensembl:
ENSRNOG00000020250
UniProt:
Q5XI70
LinkDB
All DBs
Position
1:complement(255866709..255886306)
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AA seq
351 aa
AA seq
DB search
MEEAETDATENKRASEAKRASAMLPPPPPPISPPALIPAPAAGEEGPASLAQAGAPGCSR
SRPPELEPERSLGRLRGRFEDYDEELEEDEEMEEEEEEEEEMSHFSLRLESGRADSEDEE
ERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQT
QPLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFYKERGLEVPKPAVPQPVPASKGRTKK
ALESVFRIPPELDVSLLLEFIGANEDTGHFKPLEKKFVRVSGEATIGHVEKFLRRKMGLD
PACQVDIICGDHLLERYQTLREIRRAIGDTAMQDGLLVLHYGLVVSPLKIT
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctgagacggacgccacggaaaacaagcgcgcctctgaggccaagcgagcc
tcggccatgctgccaccgcctccgcctcccatctctccgcccgccctcatcccggcgcca
gcggccggtgaggagggcccggcgtccctggcccaggcgggcgcacccggctgttctcgc
tctcggcccccggagttggagcccgagcgcagcctgggccgcttgagaggccgcttcgag
gactacgatgaagagttggaagaggatgaggagatggaggaggaggaagaggaggaggaa
gagatgagccacttctctctgcgtctggagtccggacgggcggactccgaggacgaggaa
gagcgcctgatcaacctggttgagctgaccccctacatcttgtgctccatttgcaaaggt
tacttgatagatgccaccactattacagaatgtctccacaccttctgtaaaagctgcatt
gtgagacatttttactatagcaacagatgccccaaatgcaacatagtcgtccaccagact
cagcctctttataatataaggttggaccggcagttacaagacatagtatacaaattagta
gtcaatctagaggaaagagaaaaaaagcaaatgcatgacttctataaagaaagaggtcta
gaagtccctaagcctgctgttccacagcccgtccctgcaagcaaaggaagaaccaagaaa
gccctagagtcagtgtttcgtattccgcctgaacttgatgtgtctttattacttgagttc
attggtgctaatgaagacacaggacattttaagccattggaaaagaagtttgtgcgtgtt
tcaggagaagcaactattgggcatgtagaaaaatttcttagaagaaaaatgggtcttgat
ccagcttgtcaggtagacatcatctgtggggatcacttactggagcggtaccaaactctg
cgggaaatccgacgtgcaataggtgacacagcaatgcaggatggtctacttgttcttcat
tatggtcttgtggtttctcctttaaaaataacttga
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