Rattus norvegicus (rat): 313063
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Entry
313063 CDS
T01003
Symbol
Rad54b
Name
(RefSeq) fibrinogen silencer-binding protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
313063 (Rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rno03400
]
313063 (Rad54b)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
313063 (Rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
313063
NCBI-ProteinID:
NP_001178684
RGD:
1306507
Ensembl:
ENSRNOG00000039949
LinkDB
All DBs
Position
5:29829465..29901967
Genome browser
AA seq
888 aa
AA seq
DB search
MRRSAAPSQVRGNSSKKARFVPPGRSTTGVSKEISMSPEAKLVQGAHQSQGDAGVCSSNP
WLTEGSPVEMGDGARVDPLSPVHLASKEIIESKAQEEEASSLLKYFSVVWCKASKKKHKK
WEGDAILIVKGRSFILKDMEGKDIGRGIGYKFKELENVEEGQTLMLGGKEIEILGTVSAE
DFNSGKCFQAGSGSPAVPSSQAARKCFSNPFKSVCQSTQARRDRGNDWQNCKPRYDPYTP
NALVMPRPDKSHQWAFNRSCLPTVDVVIDPHLVRHLRPHQKDGVAFLYECVMGMRAVGKC
GAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIVKRTLIVTPGSLVNNWRKEFQKWLGS
ERIKIFTVDQDHKVEEFINSAFHSVLIISYEMLLRSLDRIKTITFGLLICDEGHRLKNSG
IKTTAALSSLSCEKRVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRRIYEEPIVMSR
EPSASKEERELGERRTTELTRLTGCFILRRTQEVINKYLPPKIENVVFCRPGALQIELYR
KLLSSQSVRFCLQGLLGNSAHLICIGALKKLCNHPRLLFSFVKGKEFNSSRDENEERSLC
QGLLTVFPAGYNLLQLSESESGKLQVLVKLLAAISELRPTEKVILVSNYRQTLNLLEEVC
KCHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDI
DWNPATDIQAMARVWRDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSE
QIQFSVEELKNLFTLHENSHCVTHDLLDCECTGEKDHSDDASENPVTSRQCQLGPQKSSS
SRPLSMSQLKQWKHFSGDHLNLPDPFLERIRENVSFFFQNITNQAPAI
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagacgttctgcagcaccaagccaggtgcggggaaattcctctaaaaaagcaagattt
gtacctccaggaagaagtactacaggtgtgagtaaggagatttcgatgagtccagaggca
aaactggttcagggcgcccaccagtcacaaggggatgcaggtgtgtgcagttccaatcct
tggctcactgagggaagccctgtggagatgggtgacggggctagagtagatccgctttct
ccagttcacttggcctctaaagaaatcatagagtccaaggcacaagaagaggaagctagc
agcttgcttaaatatttcagtgtcgtttggtgtaaagcttcaaagaaaaaacacaagaaa
tgggaaggcgatgctattcttattgtaaaaggaaggtcgttcatattgaaagatatggaa
ggaaaagatattggaagaggcattggatataaattcaaagagcttgaaaatgtagaagaa
ggccaaacattgatgcttggtgggaaagaaatagagatcctgggtacagtctctgctgag
gacttcaatagtggcaagtgttttcaggctggaagcggaagtcctgccgtcccaagttct
caggctgccaggaaatgcttttctaaccctttcaagagtgtgtgtcagtcaactcaagca
aggagagacagagggaatgactggcaaaattgcaaacctcgctatgacccatacacacca
aatgcccttgttatgcctcgaccagacaagagtcaccagtgggcgtttaataggagctgc
cttcctactgtggatgtggtgatagaccctcaccttgtacgtcacctccgaccacaccag
aaagatggggtcgccttcctctatgagtgtgtgatgggaatgagagcagttggcaaatgt
ggtgccattcttgctgatgagatgggattagggaaaaccctgcagtgtatctcgctcatc
tggaccctccagtgtcaggggccttacgggggcaagccaatagtaaagaggacacttatt
gttacccctggaagcttggtgaataattggagaaaagaatttcaaaaatggctgggaagc
gaaaggatcaagatattcactgttgatcaggaccataaagtcgaggagtttatcaattct
gcatttcactctgttcttatcatcagttatgaaatgttacttcgttctctagatcgaatt
aagaccataacatttggccttctgatttgtgatgaggggcaccggttgaagaacagtggt
attaagacaacagcagccctttctagcctctcttgtgagaagagagtaattctgactggt
accccagttcagaatgatttgcaagagttttttgcattagttgattttgttaatccagga
atcttagggtctctgtcatcttataggaggatatatgaagagcccattgttatgtcaaga
gagccttctgcttccaaggaagagagagagttaggggagagaagaacaactgagctcaca
cgcctcactggatgtttcatccttagaagaactcaggaggtcatcaataaatatctcccc
cctaagatagagaacgtagtcttttgccgaccaggagcactgcagattgagctttaccga
aagctgctgagttctcaatctgtcaggttctgtctgcaaggccttttgggaaatagtgct
cacctcatttgcataggcgccctgaagaagctatgcaatcatcctcgcctcttgttcagc
tttgtgaagggtaaagaatttaactcgagtcgtgatgaaaatgaagaaaggagcctttgc
caaggcttgctgactgtgttccctgctggctacaacctgctgcagctctccgagagcgag
tcagggaaactacaggtgttagtaaagctcctggcggcgatctctgaacttcgtcccact
gaaaaagtgattttggtatccaactacagacaaaccttgaatcttttagaagaagtatgc
aagtgtcatggatatgcttgtgcaagacttgatggacaaacaccagtctctcaaagacag
caaattgttgataatttcaatagtaaatactctactgattttatttttttattaagttca
aaagctggtggtgtgggacttaatcttattggaggatctcacttaattctttatgatatt
gattggaacccagctactgacatccaggccatggctagagtgtggagagacggccagaaa
caccctgtccatgtttacagactcctgactacaggtacaatagaggaaaagatctatcaa
aggcagatcagtaagcaaggcctttctggggcggttgtagacctaaccagatcatccgaa
cagatccagttttcagtggaagagcttaaaaacttgttcacattacatgaaaattcacat
tgtgttactcatgacctgcttgactgtgagtgcacaggagagaaagatcactctgatgat
gcgtcggaaaaccctgtcacctctagacagtgtcagcttggccctcagaagtccagctcc
tcgagacctctgtccatgtcacagctgaagcagtggaaacatttttcaggagaccattta
aatctcccagacccatttctcgaaagaataagggaaaatgtgtccttctttttccagaat
ataaccaaccaagctcctgccatctaa
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