Rattus norvegicus (rat): 313216
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Entry
313216 CDS
T01003
Symbol
Rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
313216 (Rnf20)
Enzymes [BR:
rno01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
313216 (Rnf20)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
313216 (Rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
HrpB7
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
313216
NCBI-ProteinID:
NP_001101399
RGD:
1311936
Ensembl:
ENSRNOG00000006087
UniProt:
D3ZYQ9
LinkDB
All DBs
Position
5:68771507..68797240
Genome browser
AA seq
973 aa
AA seq
DB search
MSGIGNKRAAGEPGTSVPPEKKTAVEDSGTTVETIKLGGVSSTEELDIRTLQSKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLDQGLGDL
LTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVES
SRRAVSQIVTVYDKLQEKVDLLSRKLNSGDNLIMEEAVQELNSFLAQENVRLQELTDLLQ
EKHHTMSQEFCKLQGKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLAEVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQN
EKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDAKDEPTELKQDS
EDLATHSSALKASQEDEVKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEK
ERDPVKDKDKGKHDDGRKKEAEIIKQLKTELKKAQESQKEMKLLLDMYRSAPKEQRDKVQ
LMAAEKKSKAELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAVAK
QEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKE
ELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEAAQ
LADDLKAQLELAQKKLHDFQDEIVENSVTKEKDLFNFKRAQEDISRLRRKLETTKKPDNV
PKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNA
AFGANDFHRIYIG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggattggaaataaaagagcggctggagagccaggcacatctgtgcccccagag
aagaagacagctgtcgaagattcagggaccacagtggaaacaattaaactaggaggtgtc
tcttcaacggaggaattagacattcgaacactgcaatcgaaaaatcgtaagctagcagaa
atgctagatcagcggcaggccattgaagatgagcttcgggagcacattgagaagctggag
cgacgccaggccaccgacgatgcctcactgttgatcgtgaaccggtactggagccagttt
gatgaaaacatccgcatcatccttaaacgttatgatctggaccagggtttgggagaccta
ctcacagaaaggaaagccttggttgtgccagagcctgagcccgactctgacagtaatcag
gagcgcaaagatgaccgtgagagaggggaagggcaagagccagctttctctttccttgct
actttggctagcagttccagtgaggagatggagtcccagcttcaggagcgcgtggagtcc
tcccgccgtgctgtgtctcagattgtgaccgtctatgataaattgcaagaaaaagtggat
ctcttgtcccggaaactgaacagtggagataacctgataatggaggaagcagtacaggag
ctgaactccttccttgcgcaagagaatgtgaggctccaggaactgacagatctccttcag
gagaagcatcacaccatgtctcaggagttctgtaagctgcagggtaaagtagagacagca
gagtcacgagtgtccgtcttggagtccatgattgatgacctgcagtgggatattgacaaa
attcgaaaaagagaacagcggctcaaccggcatttggctgaagtcctagagcgggtgaac
tcaaaaggctataaagtgtacggagcagggagcagtctctatggaggcacaatcaccatc
aatgcccggaagtttgaggaaatgaatgctgagcttgaggagaacaaagagttggctcag
aaccgacattgtgagctagagaaacttcgtcaagactttgaagaggtcactacacagaat
gaaaagttgaaggtggagttgcggagcgcagtggaggaagtggttaaggaaaccccagaa
tatcgctgcatgcagtcacagttctctgtcctgtacaatgagagtctacagttgaaagct
cacttggatgaagctcggaccctgcttcatggcacccggggaactcaccagcgccaggtt
gaactcattgagcgagatgaggttagtctgcataagaagctgagaactgaagtgattcag
ctggaggataccttggcccaggtccgcaaggagtatgagatgttgaggatagagtttgag
cagacccttgcggccaatgaacaagcaggccccataaaccgggagatgcggcacctcatt
agcagtctccagaaccataaccaccagctgaagggggaggtcctgaggtataagcggaaa
ctcagagaggcacagtctgacctgaacaagacgcgtctgcgcagtggcagtgccctcctg
cagtcgcagtctagtactgaggacgccaaggatgaacccacagagctgaagcaagactct
gaggacctcgccactcattcctcagcattgaaggcctctcaggaggatgaagtgaagtct
aagcgggatgaggaagagagagaacgagaaaggagggagaaagaaagagagagagaacga
gaacgggaaaaggaaaaggagagagaacgagagaaacagaaactgaaagagtcggaaaaa
gagagagatcctgttaaggataaggacaaagggaagcacgatgacgggaggaagaaggag
gcagagatcatcaagcagctgaagactgagctcaagaaagcacaagagagccagaaggag
atgaagctgctcctggacatgtaccgctctgcccccaaggagcagagagacaaagtgcag
ctaatggcggccgagaagaagtcaaaggcagagttggaggatctcaggcaaagactcaag
gatctggaagataaggagaagaaggagaataagaaaatggctgatgaggacgccttgagg
aagatccgggcagtggaagagcagatcgaatacctgcagaagaagctggctgtggccaag
caggaggaagaagctctcctgtctgagatggatgtcacaggacaggcctttgaggacatg
caggagcagaacatccgtttgatgcagcagttgcgggagaaggatgatgcaaacttcaag
ctcatgtcagagcggatcaagtctaatcagatccataagttgcttaaagaggaaaaggaa
gagttagctgaccaggttttgacactgaagactcaggtagatgcccagttacaggtagta
agaaagctggaagagaaggagcacctgcttcagagtaacattggcacaggggagaaggag
ctgggtcttaggactcaagccttagagatgaataaacgcaaggccatggaggcggcccag
cttgcagatgacctcaaagcacagctggaactggctcagaagaagctccatgattttcag
gatgaaattgtggagaacagtgtcaccaaggaaaaggacttgttcaatttcaaacgcgca
caggaagacatctctaggctccgaagaaagctggagacaaccaagaagccagacaacgtg
cccaaatgtgacgagattctgatggaggagataaaggactacaaggcgcggctgacctgc
ccttgctgtaacatgcgtaaaaaggatgcagtacttaccaagtgttttcacgttttctgc
tttgagtgtgtgaagacgcgctatgacactcgccagcgcaagtgtcccaagtgtaacgct
gctttcggtgccaatgatttccatcgcatctacattggctga
DBGET
integrated database retrieval system