Rattus norvegicus (rat): 361295
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Entry
361295 CDS
T01003
Symbol
Ss18
Name
(RefSeq) protein SSXT
KO
K15623
protein SSXT
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03082
ATP-dependent chromatin remodeling
rno05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
361295 (Ss18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
361295 (Ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
361295 (Ss18)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
361295 (Ss18)
GBAF(ncBAF) complex
361295 (Ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
361295
NCBI-ProteinID:
NP_001094370
RGD:
1311919
Ensembl:
ENSRNOG00000016800
UniProt:
D4ABC5
LinkDB
All DBs
Position
18:complement(6047619..6169151)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVY
LATIADSNQNMQSLLPAPPTQNVPMGPGGMSQSGPPPPPRSHSMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPSQLSMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYSMPPGGAQHYQGQQAPMGLMGQVNQ
GSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEESSPHYCEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPTQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgaggcagcggggcaagggcgagatcacgcccgccgcc
atccagaagatgctggatgaaaataaccaccttattcagtgtataatggactatcaaaat
aaagggaaggcctcggagtgctctcagtaccagcagatactgcatacaaacctggtatac
cttgctaccatagcagactccaatcaaaatatgcagtctctcctaccggcgccgcctaca
cagaatgtgcctatgggtcctggagggatgagtcagagtggccctccaccccctccccgc
tctcacagcatgccttcagatggaatggtgggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgccaatgcagggacctggaccc
agtcagctcagcatgacgaacagctccatgaatatgccttcgagtagccacggctccatg
ggaggctacaaccattctgtgccatcgtcccagagcatgcccgtgcagaaccagatgaca
atgagtcaggggcagccaatgggaaactatggtcccagaccaaacatgaatatgcaacca
aatcaaggtcccatgatgcaccagcagcctccttctcagcagtacagcatgccacctgga
ggtgcgcagcattaccaaggacagcaggcgcccatggggctgatgggtcaagttaaccaa
ggcagtcacatgatgggccagagacagatgcctccctatagacctccacaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggagtcctcaccacat
tactgcgaaggaggaaactcgcagtacggccagcagcaggacgcttaccaaggaccacct
ccacagcaaggatacccaccccagcagcagcagtacccggggcagcagggctacccagga
cagcagcagggctacggtcctacccagggcggtccagggcctcagtatcctaattatcct
cagggtcaaggtcagcagtatgggggctatagaccaacacagccaggaccaccacagcca
ccgcagcagaggccttatgggtacgaccagggacaatatggaaattaccagcagtga
DBGET
integrated database retrieval system