Rhodococcus opacus PD630: Pd630_LPD01628
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Entry
Pd630_LPD01628 CDS
T03071
Name
(GenBank) putative ATP-dependent DNA ligase ykoU
Organism
roa
Rhodococcus opacus PD630
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AHK28857
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Position
1714253..1715281
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AA seq
342 aa
AA seq
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MASPAEELDVDGVAVRLSNPDKIYYPKLGAEGGTKRHLVEYYRTVALNGALLTALFDRPT
HLQRFPDGIEGEEIYQKRVPAKRPDHVESCEVTFPSGRKADVLRVRSAANIVWAANLGNI
TFHPWAVRCPDVDHPDELRIDLDPQPGTGFDDARAVALDVLRPLLDELGLVGYPKTSGGR
GLHVYLRIEPRWDFIEVRRAGIALAREIERRSGDRATTSWWKEERGERIFLDFNQNARDK
TIASAYSARKTPIATVSTPVTWEELVDVDPDDFTIATVPALLEKRGDPMATMGDVAQSLD
VLLEMAERDAANGLGDLPYPPNYPKMPGEPKRVQPSRDRDRK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcctgccgaagaactcgacgtcgacggcgtcgccgttcggctgtcgaatccc
gacaagatctactacccgaaactcggtgccgagggcggcacgaaacggcacctggtggag
tactaccggaccgtggcactgaacggtgcgctgctgaccgccctgttcgatcggccgacg
catctgcaacggttcccggacgggatcgagggcgaggagatctaccagaagcgggttccc
gcgaagcgccccgaccacgtggaatcgtgcgaggtcacgttcccgtccggccgcaaggcc
gacgtgctccgtgtgcgcagcgccgcgaacatcgtgtgggcggcgaacctcggcaacatc
acgttccacccgtgggcggtccggtgccccgacgtcgatcacccggacgaactgcgcatc
gacctggacccgcagccggggaccggattcgacgacgcgcgggcggtcgcgctggacgtg
ctccggccgctgctggacgaactcggtctcgtcggataccccaagacgtcgggcggccgc
gggctgcacgtgtatctccgcatcgaaccgcgctgggatttcatcgaggtgcggcgtgcg
ggcatcgccctcgcacgggagatcgagcggcgcagcggcgaccgggccaccacgtcctgg
tggaaggaggaacgcggcgaacgcatcttcctcgacttcaaccagaacgccagggacaag
accatcgcgtccgcctactcggcccgcaagacgccgatcgcgaccgtgtcgacgccggtc
acctgggaggaactcgtcgacgtcgaccccgacgacttcaccatcgcgaccgtgcccgcg
ctgctcgagaagcgtggcgatcccatggcgaccatgggtgacgtggcgcaatcgctggac
gtgctgctggagatggccgaacgggacgccgcgaacggtctcggggatctgccgtacccc
cccaattaccccaagatgccgggggaacccaagcgggtacaaccgagtcgggaccgagac
cgcaaatag
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