Rhodococcus opacus PD630: Pd630_LPD03175
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Entry
Pd630_LPD03175 CDS
T03071
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00470
D-Amino acid metabolism
roa00550
Peptidoglycan biosynthesis
roa01100
Metabolic pathways
roa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pd630_LPD03175
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pd630_LPD03175
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pd630_LPD03175
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
roa01011
]
Pd630_LPD03175
Enzymes [BR:
roa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pd630_LPD03175
Peptidoglycan biosynthesis and degradation proteins [BR:
roa01011
]
Precursor biosynthesis
Amino acid ligase
Pd630_LPD03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
RimK
ATP-grasp_4
ATPgrasp_ST
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AHK30394
LinkDB
All DBs
Position
3374971..3376077
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AA seq
368 aa
AA seq
DB search
MSKPRTRVAVIFGGRSNEHSVSCVSAGSVLRNLDPERYEVVPIGITTEGSWVLGSTDPET
LAIRGRALPSVDADGSALALTADPTRSGDLVALDDGEAGKILASVDVVFPVLHGAYGEDG
TIQGLLELAGVPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGFQVVLRPGTTTLTDEQKS
RLHLPVFVKPARGGSSIGITRVAEWAGLDDAIAHARLHDPKVIVESGIVGREVECGVLEF
PDGDVRASVIAEIRMPEGADDDEAFYDFDSKYLDDVCEFDVPAKLDESVSEEIRELAVRA
FSALDCQGLARVDFFVTEDGPVINEINTMPGFTSISMYPRMWGAVGVDYGTLVSTLVDTA
LARGIGLR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaccgcgtacccgggtagccgtcatcttcggtggccgcagcaacgagcattcc
gtgtcctgtgtgtcggccggaagcgtcctgaggaacctcgacccggaacggtacgaggtg
gtgccgatcggcatcaccaccgagggctcgtgggtcctcggctccaccgaccccgagacg
ctggccatccgcggccgggcactccccagcgtcgacgcagacgggtccgcactggccctc
accgccgacccgacgcggtccggcgacctcgtcgccctcgacgacggcgaagcgggcaag
atcctggcctcggtcgacgtcgtcttccccgtcctgcacggcgcttacggcgaggacggc
acgatccaggggctgctcgaactcgcaggtgtcccgtacgtcggtcccggcgtgctcgcc
agcgcggccggtatggacaaggaattcacgaagaagctgctcgccgcggaaggcctgccc
gtcgggttccaggtcgtcctccgcccgggcaccaccacgctgaccgacgaacagaagtcc
cgcctccacctcccggtattcgtgaagccggcccgcggcggatcgtcgatcggcatcacc
cgggtggccgagtgggccgggctcgacgacgccatcgcccacgcccgtctgcacgacccg
aaggtcatcgtcgaatccgggatcgtcggccgcgaggtcgagtgcggagtcctcgagttc
ccggacggcgacgtgcgggccagcgtcatcgccgagatccggatgccggaaggtgcggac
gacgacgaggcgttctacgacttcgacagcaaatacctcgacgacgtgtgcgagttcgac
gtacccgcgaaactcgacgaatcggtcagcgaagagatccgcgaactcgcggtgcgcgcg
ttctccgcgctcgactgccagggactcgcgcgcgtcgacttcttcgtgaccgaggacggc
ccggtgatcaacgagatcaacacgatgcccggattcacgtcgatctcgatgtacccgcgc
atgtggggtgcggtgggcgtcgactacggcaccctcgtctcgaccctggtcgacaccgcc
ctcgcgcgcggcatcggcctccgctag
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