Rhodococcus opacus PD630: Pd630_LPD03951
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Entry
Pd630_LPD03951 CDS
T03071
Name
(GenBank) putative DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Pd630_LPD03951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD03951
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Pd630_LPD03951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
AHK31164
LinkDB
All DBs
Position
complement(4145372..4146268)
Genome browser
AA seq
298 aa
AA seq
DB search
MERMRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYNRVCSECGNVVQY
ADIDKAYDSDDGVRVVLTDDDFGKLPAAEKHEIPVLQFVPTEQIDPILFEKSYFLEPDSS
SPKAYVLLATALENSDRTALVHFTLRQRTRLAAMRSRDGVLVIQTLLWPDEVRAAEFSSL
DGVDKPKAKELAMAETLVDSMADDFDPTEFTDDYQVQLRELLDEMIESGGKKVIPVAEVE
KSGEDAEVVDLVAALQRSVDAAGKKAAPAKKKPAKKAPAKTAAKKATAKSSSSERKRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcatgcggtcgatatggaagggctcgatagcgttcggactcgtgaatgtgccg
gtcaaggtctattcggcaaccgaggatcacgacatcaggtttcaccaggtccatgccaag
gacggcggccggatcaaatacaaccgcgtctgctccgaatgcggcaacgtcgtccaatac
gccgatatcgacaaggcctacgactccgacgacggcgtgcgcgtggtgttgacggacgat
gatttcggcaaactgcccgccgccgagaaacacgagattcccgttctgcagttcgtgccg
accgaacagatcgaccccattctgttcgagaagagttacttcctcgaaccggattccagc
tctccgaaggcatatgtcctactcgcgacagccctcgagaacagcgaccgaacggccctc
gtccacttcaccctccgacagcgcacccgactggccgcgatgcgttcacgggacggggtg
ctggtgatccagacgctgctgtggccggatgaggtacgggccgcggaattctcctcactc
gatggcgtcgacaagccgaaggcgaaggaactcgcgatggccgagacactcgtcgacagc
atggccgacgacttcgaccccaccgaattcaccgacgactaccaggtgcagttgcgtgaa
ctgctcgacgagatgatcgagtccggcggcaagaaggtcatccccgtcgccgaggtcgag
aagagcggcgaggacgccgaagtggtggatctcgtggccgcactgcagcgcagcgtcgac
gccgccgggaagaaggccgcacccgccaagaagaagccggcgaagaaggctccggccaag
accgcagcgaagaaggccacagcgaagtcatccagttcggaacgcaagcgcgcctga
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