Rhodococcus opacus B4: ROP_13440
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Entry
ROP_13440 CDS
T00882
Symbol
ligB
Name
(GenBank) ATP-dependent DNA ligase LigB
Organism
rop
Rhodococcus opacus B4
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
BAH49591
NITE:
ROP_13440
UniProt:
C1AX87
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Position
1420509..1422020
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AA seq
503 aa
AA seq
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MLFSQIVATSRDVGATRSRKVKVATLREALTRLEQAEVEPVVAWLSGELRQGRIGIGWRT
VADIPATPADVAAVTVSEVDGTISAVAEVSGSGSAARRRELLADLFARTTADERDFLLRL
LTGDLRQGALEGVMTDAIAAAADLPIEPVRRAFMLSGRLPATAVAAFDGGVDALTAFRLE
VGRPVRPMLASPAESLADAWSELGGDVSVEYKLDGARIQVHRNGDEVRIFTRTLREITGS
VPELVALVARLPCTSAVFDGETLALTDSGRPRPFQETMSRFGAESARDLLLHPYFFDCLH
LDGVDLLDSPLEERLKALERVAPQHRIPGLIRPDSEGAATHFDDALAAGHEGVMVKSLTA
PYAAGRRGRAWQKVKPEHTLDLVVLGAEWGYGRRTGYLSNLHLGARDPDGGAPIMVGKTF
KGLTDALLQWQTDEFPRHERARDDHTVYLHPDLVVEIELDGVQVSTRYPGGLALRFARVL
RYRPDKTAADADTIDAVRSLLPG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgctgttctcgcagatcgtcgcgacgtcccgggacgtgggggccacccgctcgcgcaag
gtgaaggtcgcgacgctgcgcgaggcgctcacccgactcgagcaggccgaggtggaaccg
gtggtggcgtggctgtccggggagctgcggcagggccggatcggaatcggctggcggaca
gtcgcggacattcccgccactcccgccgacgtcgcagccgtcaccgtgtccgaggtcgac
gggaccatctccgccgtcgccgaggtgtccggctccggatcggccgcacgccgtcgcgaa
ctgctcgcggacctgttcgcccgcaccaccgccgacgagcgggacttcctgctgcgactg
ctcaccggcgacctccgccagggcgcgctcgagggggtgatgaccgatgcgatcgcggcg
gccgccgaccttccgatcgagccggtgcgccgggcgttcatgctgtcgggacgcctgccc
gcaaccgcggtcgccgcgttcgacggcggcgtcgatgccctcactgcgttccggctggag
gtgggccgtccggtccggccgatgctggcctcccctgccgaatcgctcgccgacgcgtgg
tccgaactcggcggcgacgtcagcgtcgaatacaaactcgacggcgcgcggatccaggtg
caccgcaacggcgacgaggtacgcatcttcactcgcactctgcgtgagatcaccggcagc
gtgcccgaactcgtcgcactcgtcgcccggctgccgtgcacgtcggcggtgttcgacggg
gagacgctggcgctcaccgacagtggccgcccccggccgttccaggagacgatgagccgc
ttcggtgccgagtccgcccgcgacctgctgctgcacccctacttcttcgactgcctgcac
ctcgacggcgtcgaccttctcgactcaccgctggaggagcggctgaaggcgctggaacgc
gttgccccgcaacaccgcatccccgggctgatccgtcccgacagcgagggggccgcgacc
catttcgacgacgcactcgccgccgggcacgagggcgtgatggtcaagtcgctcaccgcg
ccgtacgcggcgggacggcgcggccgcgcctggcagaaggtgaaacccgagcacaccctc
gacctggtggtgctcggcgccgaatgggggtacgggcgtcgcaccggctacctgtccaac
ctgcacctcggcgcgcgcgaccccgacggcggcgcaccgatcatggtgggcaagacgttc
aaggggctcaccgacgcgctgctgcagtggcagacggacgaattcccgcgccacgaacgc
gcccgcgacgaccacaccgtgtacctgcaccccgacctcgtcgtggagatcgaactcgac
ggcgtccaggtgagcacgcgttaccccggcgggctcgcgctgcgattcgcgcgggtcctg
cgctaccgtcccgacaagacggccgccgacgccgacaccatcgacgccgtcaggtccctg
ctgccggggtga
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