Rhodococcus opacus B4: ROP_21290
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Entry
ROP_21290 CDS
T00882
Name
(GenBank) putative LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rop03000
]
ROP_21290
Transcription factors [BR:
rop03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ROP_21290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
Xre-like-HTH
TetR_N
HTH_6
Motif
Other DBs
NCBI-ProteinID:
BAH50376
NITE:
ROP_21290
UniProt:
C1B1V2
LinkDB
All DBs
Position
complement(2286471..2287466)
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AA seq
331 aa
AA seq
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MPASRRVTINTVAKAAGVSIATVSRVMSGSTSVTPDLAARVLEVADELSYRPSTAARGLV
LGSLRNMGVILPDLANAYFFDVVKQMHHGATADGYRMLVADYSGDAADELATALDLLGQV
DGLVLLSSRIPTSGLKELARQATPVLLVNRVELGVDLPMVAVDNFTPMMELCGHLAKLGH
RRIVYVKGSDLAWQNRERWRAIEMAKVLGIEATAVPSDGTIEGGYDVVEEALTHEPTALV
CFNDLTALGVISKLRERGLRVPEDISVTGFDDIDMARHLAPRLTTVVSPKIDLGDQAWSL
MRAALNNETTTSPPLISAEVVIRESTGPAPG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcaagtcgtcgcgtcacgataaacaccgtagcgaaggccgccggcgtctcgatc
gccaccgtctcccgcgtcatgagcggcagcacgtcggtgaccccggacctcgcggcacga
gtcctcgaggttgccgacgagctgtcctaccggcccagtactgccgcccgcggactcgtc
ctcgggtcgctgcgaaacatgggcgtgatcctgcccgacctggcgaacgcgtacttcttc
gacgtcgtcaagcagatgcaccacggggccaccgccgacggatatcgcatgctcgtcgcc
gactactccggtgacgcggccgacgaactcgccaccgcgctcgacctgctcggccaggtc
gacggcctcgtgctgctctcgtcgaggattccgacgagcggactgaaggaactcgccagg
caggcgactccggtcctgctcgtcaaccgggtggagctgggggtcgatctccccatggtc
gcggtcgacaacttcacgccgatgatggagctgtgcgggcacctcgcgaagctcggccac
cgccggatcgtctacgtcaagggctcggatctggcctggcagaaccgtgagcggtggcgg
gccatcgaaatggcgaaggtgctcgggatcgaggcgaccgcggtgccgtcggacggaacc
atcgagggtggctacgacgtggtggaagaggcgctcacacacgagccgaccgccctcgtc
tgcttcaacgacctgacggcgctcggcgtcatctccaaactgcgggagcggggactccgt
gtccccgaggacatttcggtcaccggattcgacgacatcgacatggcacggcacctggcg
ccgcgcctgaccacggtggtgagcccgaagatcgacctgggcgaccaggcgtggtcgctg
atgcgcgccgccctgaacaacgagaccaccacgtctccgccgctgatctccgcggaggtc
gtcattcgcgagtcgacggggcccgcgccgggctga
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