Rhodococcus opacus B4: ROP_35510
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Entry
ROP_35510 CDS
T00882
Name
(GenBank) putative lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ROP_35510
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rop01007
]
ROP_35510
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rop03016
]
ROP_35510
Enzymes [BR:
rop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ROP_35510
Amino acid related enzymes [BR:
rop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ROP_35510
Transfer RNA biogenesis [BR:
rop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ROP_35510
Prokaryotic type
Other AARSs
ROP_35510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAH51798
NITE:
ROP_35510
UniProt:
C1B7Z5
LinkDB
All DBs
Position
complement(3850317..3853661)
Genome browser
AA seq
1114 aa
AA seq
DB search
MSASTETHHASEAAVPTAPRPRPALGSKSGRLHQVPHIAGLILGVFSVLVFLWSISPVLR
YYVHVPREYIDTYYFDAPDTSLSWALVVALLAAALASRKRIAWWLLTIYLVLILITNVIV
SITDRNVNAMVAAVVQVVLIGILVAARPEFYTRVRRGAGWKALGVLIVGLAIGTLVGWGL
VELFPGTLPQGERFLWALNRVTALAAADNEQFSGRPHGFVNTLLGLFGAMALLAAVITLF
RAQRSHNALTGNDESALRGLLLQYGADDSLGYFATRRDKAVVFAPSGKAAITYRVELGVC
LASGDPIGDPEAWPHAIEAWQTLASQYGWATAVMGASETGATAYNKAGLTVLQLGDEAIL
RTREFNLSGRDMRQVRQAVTRVRRQGVTVRIRRHRDVPPEEMAEAIRLADAWRDTETERG
FSMALGRLGDRLDGDCLLVEAIAEDGEIDGILSLVPWGPTGVSLDLMRRKPTSPNGVVEL
MVSELATTSDQFGITKVSLNFAVFRSVFEEGSRIGAGPILRIWRSILVFFSRWWQLEALY
RSNVKYQPEWVPRFLCFDDNRELLRVGFASAVAEGFVTLPRFGRSGTHDAIEHTGHHAAV
PAALVAAEGLHSDGSAPGEGLAPTATGPKRPEQVRVRLDKLTGLAEQGIDPYPVAYPPSH
TVTEAVESPEGTTVRIAGRLLRIRDYGGVVFAVVRDWSGDIQVLVDEARVGTDRIRAFAA
EFDLGDLVEVAGVIGYSRRGALSLLANEWRMTGKCLHPLPDKWKGLSDPETRVRQRYVDL
AINTDARRLLEARSAVVKSLRDSLGGRGFLEVETPILQQVHGGANAAPFLTHINAYNLDL
YLRIAPELYLKRLCVAGMEKVFEIGRVFRNEGVDFKHNPEFTILEAYEAHSDYEKMMVLC
RELIQTAAVAAYGREIIMRPGPDGTLVEVDISGEWPVKTMHQAVAEKLGVDVSPETPLAE
LQRLCDEHEIPYQSTWDAGAVAQEMYEHLVEDYTEFPTFYTNFPTSMSPLTRPHPTIPGV
AAKWDLVAWGVELGTAYSELTDPVDQRNRLTEQSMLAAGGDEEAMELDEDFLQALEHAMP
PTGGLGMGVDRVVMLITGGSIRETLAFPLAKPRQ
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctagcaccgagacacaccacgcgtccgaggcggccgtccccaccgcaccacgg
ccccgacccgccctcggctcgaagagcgggcgcctgcaccaggttccccacatcgcggga
ctgatcctgggcgtcttctcggtgctcgtattcctgtggagcatctccccggtgctgcgc
tactacgtgcacgtgccgcgggagtacatcgacacgtactacttcgacgcccccgacacc
agcctgtcgtgggcgctggtagtcgcgctgctcgcggcggcgctggccagccgcaaacgc
atcgcctggtggctgctgacgatctatctggtgctgatcctgatcaccaacgtgatcgtg
agcatcaccgaccggaacgtgaacgcgatggtcgccgccgtggtccaggtggtgctgatc
ggcatcctcgtcgcggcccggcccgagttctacacccgggtccggcgcggcgccggctgg
aaggcgctgggcgtgctcatcgtcgggctcgcgatcggcactctcgtcgggtggggactc
gtcgaattgttccccggcaccctgccgcagggcgagcgattcctgtgggctctcaaccgc
gtgaccgcgctggccgccgccgacaacgaacagttcagcggacgaccgcacggattcgtc
aacaccctcctcggcctgttcggcgccatggccctgctcgccgccgtcatcaccctgttc
cgcgcccagcgctcccacaacgcgctcaccggcaacgacgaatcggcgctgcgcggactg
ctgctgcagtacggcgcggacgactccctcggctacttcgccacccgccgcgacaaggcc
gtcgtgttcgcgccgagcgggaaggcggccatcacctaccgcgtcgaactcggcgtctgc
ctcgccagcggtgatccgatcggcgaccccgaggcctggccacacgcgatcgaggcgtgg
cagacgctcgcgtcccaatacggttgggccaccgccgtgatgggcgccagcgaaaccggg
gccaccgcctacaacaaggccggtctcaccgtgctccagctcggcgacgaggcgatcctc
cgcacccgcgagttcaacctcagcggtcgcgacatgcggcaggtccgccaggccgtcacc
cgcgtccgccgccagggcgtcaccgtccggatccgcaggcaccgcgacgtcccccccgag
gaaatggccgaggccatccggctcgcggacgcctggcgcgacaccgagaccgagcgcgga
ttctcgatggcgctcggccggctcggcgaccgcctcgacggcgactgcctgctggtggag
gccatcgccgaggacggtgagatcgacggcatcctgtcgctggttccgtggggaccgacc
ggtgtctcgctcgacctgatgcgccgcaagccgacctcccccaacggggtcgtcgaactg
atggtgtccgaactggccaccacctccgaccaattcggcatcaccaaggtgtcgctgaac
ttcgcggtgttccgctcggtcttcgaggagggctcccgcatcggggccggacccattctg
cgaatctggcgctcgatcctcgtcttcttctcccgatggtggcagctcgaggcgctctac
cgatccaacgtgaagtaccagccggagtgggtgccgcggttcctctgcttcgacgacaac
agggaactgctgcgcgtcggattcgcctcggccgtcgcggaaggattcgtgacgctgccg
cggttcggccgttccgggacccacgacgccatcgagcacaccggccaccacgccgcggtt
cccgccgcactcgtcgccgccgagggattgcactccgacggcagcgcccccggtgagggc
ctcgcaccgacggcgaccggacccaaacgtcccgagcaggtccgcgtccggctcgacaag
ttgaccggcctggcggaacagggcatcgacccctatccggtcgcgtacccgcccagccac
accgtgaccgaggcagtggaatcccccgaggggacgacggtccgcatcgcgggacgcctg
ctccggatccgcgactacggcggcgtcgtgttcgcggtggtccgggactggtccggagac
atccaggtcctcgtcgacgaagcccgggtgggaaccgatcggatccgggcgttcgccgcc
gaattcgacctcggcgacctcgtcgaggtcgcgggtgtcatcggctacagccgccgggga
gcgctgtcgctgctggcgaacgagtggcgcatgaccggcaagtgcctgcaccccctgccc
gacaagtggaagggactgtccgacccggagacccgggtgcggcagcggtacgtcgacctc
gcgatcaacaccgatgcccggcgcctgctcgaggcccgcagcgccgtcgtgaagtcgttg
cgggattcgctcggcggccgcggcttcctcgaggtggagaccccgatcctgcagcaggtc
cacggcggcgcgaacgcggccccgttcctcacccacatcaacgcctacaacctggacctc
tacctgcggatcgcgccggagctgtacctcaagcggctctgcgtcgccggcatggagaag
gtgttcgagatcggccgcgtcttccggaacgagggcgtcgatttcaagcacaacccggag
ttcaccatcctcgaggcgtacgaggcgcacagcgactacgagaagatgatggtgctgtgc
cgggaactcatccagaccgcggcggtcgccgcgtacggacgcgagatcatcatgcgcccc
ggacccgacggcacgctggtggaggtcgacatctccggcgaatggcccgtcaagacgatg
catcaggcggtcgcggaaaaactcggcgtcgacgtctcccccgaaacaccgctcgcggaa
ctgcaacggctgtgcgacgaacacgagatcccgtaccagtcgacctgggacgcgggcgcc
gtcgcgcaggaaatgtacgagcacctcgtcgaggactacaccgaattccccacgttctac
accaacttcccgacctcgatgtcaccgctgacgcgtccgcaccccaccattccgggggtc
gcggcgaagtgggacctcgtcgcgtggggcgtcgaactcggcaccgcgtacagcgaactc
accgaccccgtcgatcagcggaaccggctcaccgagcagtcgatgctcgccgccggcggc
gacgaggaggcgatggaactcgacgaggacttcctgcaggccctcgagcacgccatgccc
ccgaccggtgggctcggcatgggcgtcgaccgtgtcgtcatgctcatcaccggcggcagc
atccgcgaaaccctcgccttccccctggccaagccgaggcaatga
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