Rhodococcus opacus B4: ROP_51650
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Entry
ROP_51650 CDS
T00882
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03030
DNA replication
rop03430
Mismatch repair
rop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ROP_51650
03430 Mismatch repair
ROP_51650
03440 Homologous recombination
ROP_51650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rop03032
]
ROP_51650
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_51650
Enzymes [BR:
rop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ROP_51650
DNA replication proteins [BR:
rop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ROP_51650
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ROP_51650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BAH53412
NITE:
ROP_51650
UniProt:
C1AUS2
LinkDB
All DBs
Position
complement(5637480..5638223)
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AA seq
247 aa
AA seq
DB search
MTSWSDRPICAFDLETTGPDPTDARIVSACIAVVDAHHFESRTWLLDPEVPIPQGASDVH
GISTEYARAHGQDYATGYREIRDALYDAWTRDHAVVAFNASYDLTVMHTEGLRLGLPELV
HGIVVDPYVIDREMDRYRKGRRTLGAVCEHYGIALEDAHEAEADALAAAHLARTLAQEYP
NLRALDIMTHQADWHAERQRDFVDYLVRQGRDASDVNGEWPIRGLPRSASPDRVTGRRRA
RARAPAR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctggtcggacagaccgatctgcgcgttcgatctggagacgacggggcccgac
cccaccgacgcccgcatcgtctccgcgtgcatcgccgtcgtcgacgctcaccacttcgag
tcgcgcacctggctgctcgacccggaggtccccatcccgcagggcgcgtcggacgtgcac
ggaatctccacggagtacgcccgggcccacgggcaggactacgccaccgggtaccgcgag
atccgcgacgccctgtacgacgcgtggacccgggaccacgccgtcgtcgcgttcaacgcc
tcctacgacctgaccgtcatgcacaccgagggtctgcggctcggactgcccgaactcgta
cacggcatcgtggtcgacccctacgtcatcgaccgcgagatggaccggtaccggaagggc
aggcgcaccctcggtgcggtgtgcgagcactacggcatcgcgctggaggacgcccacgag
gcggaggccgacgcgctcgccgccgcacacctcgcccggacgctggcgcaggagtacccc
aatctgcgggccctcgacatcatgacccatcaggccgactggcacgcggaacggcagcgc
gacttcgtcgactacctcgtccggcaggggcgcgacgcgtcggacgtcaacggcgagtgg
ccgattcgcggactcccccgttccgcatcgcctgaccgggtcacgggccgtcggagagcg
cgcgcgagagcaccggcccgatga
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