Rhodococcus opacus B4: ROP_65580
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Entry
ROP_65580 CDS
T00882
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00470
D-Amino acid metabolism
rop00550
Peptidoglycan biosynthesis
rop01100
Metabolic pathways
rop01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ROP_65580 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROP_65580 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ROP_65580 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rop01011
]
ROP_65580 (ddl)
Enzymes [BR:
rop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
ROP_65580 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rop01011
]
Precursor biosynthesis
Amino acid ligase
ROP_65580 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
RimK
ATPgrasp_ST
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
BAH54805
NITE:
ROP_65580
UniProt:
C1B2N8
LinkDB
All DBs
Position
7175138..7176244
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AA seq
368 aa
AA seq
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MSKPRTRVAVIFGGRSNEHSVSCVSAGSVLRNLDPERYEVVPIGITTEGSWVLGSTDPES
LSIRGRSLPSVDADGSALALTADPTRSGDLVALDDGEAGKILASVDVVFPVLHGAYGEDG
TIQGLLELAGVPYVGPGVLASAAGMDKEFTKKLLAAEGLPIGFQVVLRPGTATLTDEQRS
RLHLPVFVKPARGGSSIGITRVAEWAALDDAIAHARRHDPKVIVESGIAGREVECGVLEF
PDGDVRASVIAEIRMPEGADDDEAFYDFDSKYLDDVCEFDVPAKLEDSVSDEIRALAVRA
FSALDCQGLARVDFFVTEDGPVINEINTMPGFTSISMYPRMWDAVGVDYGTLVSTLVDTA
LARGTGLR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaccgcgtacccgggtagccgtcatcttcggtggccgcagcaacgagcattcc
gtgtcctgtgtgtcggccggaagcgtcctgaggaatctcgacccggaacggtacgaggtg
gtgccgatcggcatcaccaccgagggttcgtgggttctcggctccaccgaccccgagtcg
ctgtccatccgcggccggtcgttgcccagtgtcgacgccgacgggtccgcgctggcgctc
accgcagatccgacgcggtccggcgacctcgtcgcactcgacgacggcgaagcgggcaag
atcctggcgtccgtcgacgtcgtcttccccgtcctgcacggcgcctacggcgaggacggc
accatccagggcctgctcgagctcgccggtgtcccgtacgtcggtcccggcgtgctcgct
agcgcggcaggcatggacaaggaattcacgaagaaactgctcgccgcggaaggcctgccg
atcgggttccaggtcgtcctgcgtcccggcaccgccacgctgaccgacgagcagaggtcg
cgcctccacctcccggtgttcgtgaaaccggcccgcggcggctcgtccatcggcatcacc
cgggtggccgagtgggccgcactcgacgacgccatcgcccacgcccgccggcacgatccc
aaggtgatcgtcgaatcggggatcgcaggccgcgaggtcgagtgcggagtcctcgagttc
ccggacggcgacgtgcgggccagcgtcatcgccgagatccggatgccggaaggggccgac
gacgacgaggcgttctacgacttcgacagcaaatacctcgacgacgtgtgcgagttcgac
gtgcccgcgaaactcgaggactcggtcagcgacgagatccgcgcactcgcggtgcgcgca
ttctccgcgctcgactgccagggactcgcgcgcgtcgacttcttcgtcaccgaggacggc
ccggtgatcaacgagatcaacacgatgccgggattcacgtccatttcgatgtacccgcgc
atgtgggacgccgtgggcgtcgactacggcaccctcgtctcgaccctggtcgacaccgcc
ctcgcgcgcggcaccggcctgcgatag
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