Rhodococcus opacus B4: ROP_71300
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Entry
ROP_71300 CDS
T00882
Name
(GenBank) putative ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rop
Rhodococcus opacus B4
Pathway
rop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROP_71300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rop02000
]
ROP_71300
Transporters [BR:
rop02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ROP_71300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
BAH55377
NITE:
ROP_71300
UniProt:
C1B5W6
LinkDB
All DBs
Position
7785227..7786801
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AA seq
524 aa
AA seq
DB search
MFDRSSRRRRYPVAVAVLAAGVVVSCGTATGEHGAQGEVDRTATLRVAGNVVPNNLDPHQ
SGNYQIDFPFLSPVYDRLTQAVSGPTIAPMVAESWTFADDGRSVDFTLRNDVTFHDGTPV
DAQAVVASLARARDPQKSKVAGRFDMVTGVDAVDGNRVRISTSRPALDLPAVLSTTEAAI
VNVKALDAGLDIGRTDAGSGPYRFDQVRPGDRVTYVRYDGYWDPDAQKPQRLELIGMADD
NSRLNAFRSGQVDAIKVDPDQYDEIRAVTGGSGFEVHEYPTVQSYAVQLDIGTPGLENAK
VRQALNYAIDREGINSALLNGKCAPLSQPLPEGVDGHDDSRTALYTHDPVKAKALLKEAG
APDNLSLRVIYVAGASPQQEMATSVQAQLRDIGVDAQLLPIPAVDAQSTFRQGDYELLNS
RLAYPIPGQSLLLNYMADYRFPSPPSAQFSETVLQSLDPRLDDGERTELLRRASGIAADD
AYDVFICGVPTIVAYSSSTVGMDTLGQADFTSIFDVRYAGKTTK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagaagttctcgtcgccgtcgatacccggtggcggttgctgtgctggccgcc
ggcgtcgtggtctcgtgtgggaccgcgacaggcgagcacggggcacaaggcgaggtggat
cgcacggcgactctgcgagtggccggaaacgtcgtcccgaacaatctcgatccccaccag
tcgggcaactatcagatcgacttcccgtttctgtctcccgtgtacgaccggctgacccaa
gctgtcagtggtccgacgatcgcaccgatggtcgccgaatcgtggacgttcgccgacgac
ggaaggtcggtcgatttcacgcttcggaacgacgtgacgttccacgacgggacgccggtg
gacgcccaggctgtcgtcgcgagccttgcccgcgcgcgtgatccgcagaagtcgaaggtg
gcgggcagattcgacatggtgaccggtgtggacgccgtcgacgggaacagggtgcggatc
tcgaccagtcgcccggcgctcgatctccccgccgtgctgtcgacgaccgaggcggcgatc
gtgaatgtgaaggctctcgatgcgggactcgacatcggccgcacggacgccggttcggga
ccgtaccgcttcgatcaggtgcgccccggtgatcgtgtgacgtacgtgcgttacgacggc
tactgggatccggacgcgcagaagccccagcggctcgagctgatcggaatggctgacgac
aattcacggctcaatgcgttccgttccggacaggtcgacgccatcaaggtcgatccggac
cagtacgacgagatccgagctgtcaccggaggttcggggttcgaggtacacgagtatccg
accgtccagtcgtacgccgtccaactcgacatcggcacgcccggactcgagaacgcaaag
gtccggcaggcgttgaactatgccatcgaccgcgagggtatcaattcggcgctgctgaac
ggaaagtgtgcaccactctcgcaaccgcttcccgaaggcgtggacggccacgacgacagc
aggaccgccctctatacgcacgatccggtcaaggcgaaggctctgctgaaggaggcgggg
gcgccggacaacctgtccctgcgcgtgatctatgtcgcgggcgcgtcgccgcaacaggaa
atggcgacttcggttcaggcacaacttcgtgacatcggcgtcgacgcccagttgttgccc
attccggctgtcgatgcacagtcgactttccgtcagggcgactatgagctcctgaattcg
cggttggcgtatccgattcccggccagtcactgttgctgaactacatggccgactaccgc
ttcccgagcccgccgtcggcccagttctccgagacggtgctgcaatcgctggacccgcgg
ctcgatgacggcgagagaaccgagctgttgcgccgcgcctccggcatcgcggccgacgat
gcatacgacgtcttcatctgtggggtaccgacgatcgtcgcgtactcgtcctcgacggtc
ggcatggacacgctggggcaggcggacttcacgagcatcttcgacgtgcgctatgccgga
aagaccaccaagtga
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