Raoultella ornithinolytica B6: RORB6_12675
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Entry
RORB6_12675 CDS
T02625
Name
(GenBank) DNA-binding transcriptional activator CadC
KO
K03765
transcriptional activator of cad operon
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ror03000
]
RORB6_12675
Transcription factors [BR:
ror03000
]
Prokaryotic type
Other transcription factors
Others
RORB6_12675
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
CadC_C1
Trans_reg_C
TPR_2
Homez
Motif
Other DBs
NCBI-ProteinID:
AGJ87216
LinkDB
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Position
complement(2781434..2782966)
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AA seq
510 aa
AA seq
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MQQPVVRVGEWLVTPSVNQISRKGRQLTLEPRLIDLLVFFARHPGEVLSRDELIDNVWTR
NVVTSHVVTQSISELRKSLKDGNDSSLEYIATVPKRGYKLTVPVIWCTEEGEEPAMAISP
AVPAATPDLTTPTRAAGEIEQGQTPSAKPEKRRRITTFWVWILFLLALGSCVALVALSSI
ESRPPVNKARLLLNPRDIDIHLLKGNSCTNWASQHSYAVGLGSLVTTSLNTFSTFMVHDK
TNYNINEPSSSGKTLTIEFVNQRHYRAQQCFMSVQMVDNADGSTMMDKRYFITSDNQLAI
QNDLLSSLSEALKQPWSERMQAMLKQYQPSHSTALTHFYESHQLLMNGDVDSLGKASALL
DDVIKDSPEFAYAYAEKTLVDVLRHSQQPLNKEQLNALYAEITRVGDMPGIKDTAVFYQI
KTVDLLGQGKVDEAYNAINTGIDLEMSWMNYVLLGKVYEMKGENREAADAYLTAFNLRPG
ENTFYWIENAVFQTSVTRVVPYLDNFLSSE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacctgttgttcgcgtgggagaatggctggttacaccctctgttaaccaaatc
agccggaaggggcgccagcttactctggaaccgcgcttaatcgatcttttggtcttcttt
gcccgtcaccctggtgaagtgctcagcagggacgagcttattgataatgtctggacacgt
aacgtggtcaccagccacgtcgtcacgcagagtatttccgagctacgtaagtcgttgaaa
gatggcaatgatagtagcctcgaatatattgcgacggtacccaagcgcggctataagctc
acggtgccggtcatctggtgcacggaagagggggaagagcccgcgatggcgatctcccct
gcggtccccgctgcgacgcctgacctgacgaccccgacgcgcgctgccggcgagattgag
caaggccagacgccgtccgcaaaaccggagaagcgccgacgtattactaccttctgggta
tggatcctgttcctgctggcgctgggttcctgcgtggccctggtggcgctgtcgtcgatc
gagtcgcggccaccggtgaataaagcgcgcctgctgctgaacccgcgcgatatcgatatc
catctgctgaaaggtaactcctgcaccaactgggcatcgcagcattcgtatgcggtgggc
ctgggcagtctggtgaccacgtcgctcaacaccttctcgacctttatggtgcatgacaaa
accaactacaacattaatgagccaagcagttcaggtaaaacgctgacgattgagttcgtc
aaccagcggcactatcgcgcgcagcagtgctttatgtccgtgcagatggtggataacgcc
gacggttcaacgatgatggacaaacgttatttcattaccagcgacaaccagctggcgatt
caaaacgatctgctgagcagcttatcggaggccttaaagcagccgtggtcggaacgcatg
caggcgatgctgaaacagtatcaaccgtcgcacagcacggcgctgacccatttctacgag
tcgcatcagttattaatgaacggtgatgtcgattccttaggtaaggccagcgcgctgctt
gatgatgtgattaaagactcgcctgagtttgcttacgcctatgcggaaaaaacgctggtg
gatgttttgcgtcattcgcagcagccgttaaataaagagcagctcaacgcgctgtacgct
gaaatcacccgggttggcgatatgccggggatcaaagatacggcggtattttaccaaatt
aaaacagtggatttgctgggccagggtaaagtcgatgaagcgtataacgcgattaatacc
gggatcgaccttgagatgtcgtggatgaattacgtgctgctgggtaaagtctacgagatg
aaaggggagaaccgggaagctgcggatgcttatctgacggcctttaatttacgcccgggc
gagaacaccttttactggattgaaaatgcagtattccagacctcggttacccgcgtggtc
ccgtacctcgataatttcctctcttcagaataa
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