Raoultella ornithinolytica B6: RORB6_16310
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Entry
RORB6_16310 CDS
T02625
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ror03000
]
RORB6_16310 (treR)
Transcription factors [BR:
ror03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RORB6_16310 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_IclR
HTH_3
HTH_7
MarR_2
Peripla_BP_4
HTH_Tnp_ISL3
AAA_18
HTH_Crp_2
SpoIIID
HTH_28
HTH_26
CENP-B_N
MarR
HHH
TrmB
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AGJ87943
LinkDB
All DBs
Position
3587359..3588306
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVNERTRERVEAVMQQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPALVGEHLGILARRNID
GVVLFGFTGISEEMLTPWRESMVLLARDAPGFASVCYDDNGAVNMLMQRLYDGGHRHISF
LGVPHSDVTTGQRRHQAYLNFCEQHQLIPSAALPGLAMKQGYENVAGVLTPDTSALVCAT
DTLALGASKYLQEQRIGHLQVASVGSTPLMKFLHPEILTVNPGYAEAGRQAAQQLIAQIG
GQAEPRQIVIPAALI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaagatatcgcgcgcttaagcggcgtcgggaaatcgacg
gtatcccgcgtgcttaataacgaaagcggcgtcaatgagcgcacccgtgaacgggtcgag
gcggtgatgcaacagcacggcttctcgccctcccgctcagcgcgggcgatgcgtggtcag
agcgataaagtggtggcgattatcgtcacccgtctggactcgctgtcggaaaaccttgcc
gtacagaccatgctgcccgccttttacgagcaaggttacgatccgattatgatggaaagc
cagttctctcccgcgctggtcggcgagcacctggggatcctcgcccgccgcaatatcgac
ggcgtggtactgtttggctttaccggcattagcgaagagatgctgacgccgtggcgggaa
tcgatggtgctgctggcccgcgacgcgccgggattcgcctccgtctgctacgacgacaac
ggcgcggtaaacatgctgatgcagcgtctgtacgatggcggtcatcggcatatcagcttc
ctcggggtaccgcatagcgacgtcaccaccgggcagcgccgccatcaggcctacctcaat
ttttgcgagcagcatcagttgatcccgtccgccgccctgccgggcctggccatgaaacag
ggttatgaaaatgtcgccggcgtattgacccccgataccagcgcgctggtgtgcgcgacc
gataccctcgccctcggcgccagcaagtatttgcaggagcaacgcattggacatctgcag
gtcgccagcgtcggcagtacgccgctgatgaagtttctccatccggaaatcctgaccgtg
aatcccggttacgccgaggccggtcgccaggcggcccaacagctgatcgcccagatcggc
ggccaggcagaacctcgtcaaatcgtcattcccgccgcgctgatttaa
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