Roseivivax sp. THAF197b: FIV09_19480 Help Entry FIV09_19480       CDS       T06253                                  Symbol virD1 Name (GenBank) T-DNA border endonuclease virD2   KO K18434   type IV secretion system T-DNA border endonuclease VirD2 Organism rot  Roseivivax sp. THAF197b Brite KEGG Orthology (KO) [BR:rot00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:rot02044]     FIV09_19480 (virD1) Secretion system [BR:rot02044]  Type IV secretion system   Conjugal DNA-protein transfer (VirB/D) protein    FIV09_19480 (virD1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Relaxase Motif Other DBs NCBI-ProteinID:  QFS85033 UniProt:  A0A5P8Z616 LinkDB All DBs Position pTHAF197b_b:27422..29755 Genome browser AA seq 777 aa AA seqDB search MRLNDAVDAVTGEVFRDGWSRIRGSMQGLHVAKQKQLMRAAAGHRPAVFKAIRGGGTHTK SQLANQLDYLTTKSTHIVDSSGFLDGKAKLEAGDIKDLTERFAKRWDAGFKPKLGQTTHM LMSFPIGTRGEDVRDIATDVAERFFQSDAGHFDYIIAVHEDRDHPHAHLVLNRRSQEGEF FFLGRNHRFNYDDFRLAMVEEAEKYGVRLEATRRVDRGVVHYPAPTREVYAAKEEGRAPR ERERVGADLNRTLAEIANTRTVYHSLAAEASREAREDIAGALFRAGEVLAHGGQVDRTGD VYMAEDQSFEDLRSLYAEKLARVQGMIAEKSDAERPALEKRLIEIQTQVQHMQPLGLRSS TLSEAPSEGGVYSEANIQESHLERLAEPRLRSRIDAALRGTGISTSEVVARIETGASNAA LEHQWIADDLSKVAEARDLNLERRADLEQARDILNDVHVELGTLLERENVLRRDGVVEAE PVSERFHYHRDAVRAMEGTIRQEMRADGLTAQQIEDRDWEVVSRAERRIETEQRAYLEAH PELLARPTDVIDRSEPYRETITDVARASGITREVDRIMEARDIRTSVADAVADDLRVRYP DMPSHLARGLGATYAAVVEIRDTEAINQVRRETEMREGLGSGTRDERLATGDETAPQSNR TGRLADEIARVLDHERAGELSAPFETEAERDAFRTEIARVLDDRQLERLTSGDADALDKV LEDRLDRLYVAKVYLQSDAATANTEALRQVVDDLADAEYEKHRIGDVDGETERGQVH NT seq 2334 nt NT seq  +upstreamnt  +downstreamnt atgcggctgaatgatgcggttgacgcagttaccggggaggttttccgggatggctggagc cggatccggggctcgatgcaggggctacatgtcgccaagcagaaacagctcatgcgcgcg gcagccgggcaccgtccggcggtcttcaaggcgatccggggcgggggtacgcataccaaa tcacagctcgcaaaccagctcgattacctcaccaccaagtccacccatatcgtcgactcg agcgggtttctggacggcaaggcgaagctcgaggccggtgacatcaaggacctgaccgag cgctttgccaagcggtgggatgcgggcttcaagcccaagctcggacagaccacgcatatg ctcatgtccttccccatcggcacgcggggcgaggatgtgcgtgacatcgcgacggatgtg gccgagcggttcttccagagtgacgcggggcatttcgactacatcatcgcggtgcatgaa gaccgcgatcacccgcatgcgcatctggtgctgaaccgccgctcgcaagaaggcgagttc tttttcctcgggcgcaaccatcgcttcaactatgacgatttccgccttgccatggtcgag gaggcggaaaagtatggtgtacggctggaggccacgcggcgggtggatcgcggggttgtg cattacccagcccctacccgcgaggtttatgcggcgaaagaagagggtcgcgcgccccgc gagcgggaacgtgtgggggccgatctgaaccggacgctcgcggagattgccaataccaga accgtctaccactcgcttgccgcggaggcttcgcgtgaggcccgcgaggatattgccgga gccctctttcgcgcgggcgaggtgctggcgcatggcgggcaggtggaccgaacaggagat gtgtatatggccgaggatcaaagctttgaggatttgagaagcctctatgcggaaaagctc gcgcgggtgcagggcatgatcgccgagaagtctgacgcggaacgtcccgcgttggaaaaa cgcctcatcgagatccagacacaggtccaacacatgcagccgctcggtttgcgatcatcc acgctgtctgaggcgccgtcggagggcggggtctactcagaggcaaacatccaagagagc catctcgaacgcctcgccgagccgcgcctgcgctcacggatcgacgcggccctgcggggt acggggatcagcacatcggaagtggtggcccggatcgagacgggcgcctcaaatgcagcg ctcgagcatcaatggatcgccgatgatctctccaaggtggccgaggcacgcgatctgaac ctcgaacgccgcgccgatctggaacaggcgcgcgacattctcaacgatgtccatgtcgaa cttggtacgctgttggagcgggaaaacgtgctgcgccgggatggcgtcgtggaagcggaa ccggtcagcgaacggttccattatcaccgggacgcggtccgggcgatggaagggacaatc cgacaggagatgcgcgcagacggcctaaccgcgcagcagatcgaggaccgggactgggag gttgtctcaagggcggagcgccggatcgagacggagcagcgcgcgtatctcgaggcgcac ccggagctgctcgcacgcccaaccgatgtgatcgaccggtctgaaccctatcgggagacc atcaccgatgtggcccgcgccagcgggatcacccgcgaggtcgaccggatcatggaggcg cgcgacattcgcacgtccgttgcggatgctgtcgcggatgatttgcgcgtgcgctatccg gacatgccgtcccacctcgcccgtgggctcggcgcgacctatgccgccgttgtggagatc cgggacactgaggccatcaatcaggttcgccgcgaaaccgagatgcgcgaggggcttggg tctggcacgcgtgacgaacgtctagccaccggcgatgaaactgcgccgcagtctaaccgt accggccgcctcgcagacgagattgcgcgtgtcttggaccatgagcgggcgggggagttg tccgcgcccttcgagacggaggcggagcgggatgctttccgaaccgagatcgcgcgggtg cttgatgaccgtcaacttgagcggctcacatccggcgatgccgatgcgttggacaaggtt ctcgaggaccgcctcgaccggctctatgtcgccaaggtctatctgcaatcggatgccgcg acggccaacacggaggccttgcgccaggtggtcgatgatctcgccgacgccgagtatgaa aaacaccgcattggcgatgtggatggcgaaaccgagcggggccaggtccattga

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