Rahnella sikkimica: BV494_03475
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Entry
BV494_03475 CDS
T05331
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rox
Rahnella sikkimica
Pathway
rox02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_03475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_03475
Transporters [BR:
rox02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BV494_03475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AVF34052
UniProt:
A0A2L1UM97
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All DBs
Position
786823..788403
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AA seq
526 aa
AA seq
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MSNTAISTFRKTTQTRIAGGIFLALSGLSFAAQAAVPKDMLVIGKAADPQTLDPAVTIDN
NDWTVTYPAYQRLVQYKTENGKGSTQVEGDLAASWTASPDQLVWTFKLKPGAKFDDGTDV
NADAVKWSFERLMKIAQGPSEAFPKDMAVTVVDPLTVTFTLKTPFAPFLYTLANDGAGIV
NPAIAKANPADEGKAWLAGHTAGSGPYKLDRWQKGQQLVLVPNPHYSGAKPAFKRVTVKI
IGESATRRLQLSRGDLDIADSLPMDQLAALKKEDKVAVEEFPSLRVTYLYLNNAKTPLNQ
VDLRRAISSAVDYQGMVKGILGGNAKQMRGPIPDGMWGFDPTAKQYTLDLTQAKADLEKV
KDKPQTLDFLYSDNDPNWESIALAVQASLGQAGISVKLEKLANATMRDRIGQGDYDISIG
NWSPDFADPYMFMNYWFESDKKGLPGNRSFYSNPDVDALLKKAVSVTDQKQRTDYYQQAQ
KIVIDEAAYVYLFQKNYQVAMNKDVKGFVFNPMLEQVFNVSQMSKK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacagcaatcagcacgttccgtaaaacgactcaaacacggatcgccggtggc
atttttctcgccctgtcaggtttgagttttgccgcacaggccgccgttccgaaagacatg
ctggtgatcgggaaagccgctgacccgcaaacgctggatccggcggtgacaatcgataac
aacgactggacggtgacgtatccggcgtatcagcgtctggtgcagtacaaaactgaaaac
ggcaaaggctccacgcaggtggaaggggacttagcggccagctggacggcgtcgccggat
caactcgtctggacgtttaagctcaagccgggcgcgaaatttgacgacggcaccgacgtc
aacgccgatgcggtgaaatggtcgtttgaacgcctgatgaaaattgcgcagggaccgtcg
gaagcgtttccgaaagatatggcggtgacggtagttgatccgctgaccgtcacgttcacg
ctgaaaacgccattcgcgccgttcctgtatacgctggccaatgacggcgcgggcattgtg
aatccggcgattgccaaagccaatccggctgatgaaggcaaagcctggctggccggtcat
accgccggttccggcccgtataaactcgatcgctggcagaaaggtcagcaactggtgctg
gtgccgaacccgcattacagcggcgcaaaaccggcctttaaacgcgtcacggttaagatt
attggtgagagcgccacgcgccgtctgcaactgtcgcgcggcgatctggacattgccgac
tccctgccgatggaccagctggcggcgctgaaaaaagaagacaaagttgccgttgaagaa
ttcccgtcactgcgcgtgacgtatctgtatctcaataacgccaaaacgccgcttaaccag
gtggatctgcgccgtgcgatttcgtctgcggtggattatcagggcatggtgaagggcatt
ctcggcggtaacgccaaacagatgcgcgggccgatcccggatggcatgtggggttttgac
ccgacggccaaacaatacacgctggatctgacgcaggcgaaagccgatctggaaaaagtg
aaagacaagccgcagacgctggacttcctctattccgataacgatccgaactgggaatcc
atcgcgcttgccgtgcaggccagcctcggtcaggccgggatcagcgttaagctggaaaaa
ctggcgaacgccaccatgcgtgaccgtatcgggcagggcgattacgacatttcgatcggc
aactggagtccggatttcgccgacccgtacatgttcatgaactactggttcgagtccgac
aaaaaagggctgccgggaaaccgttcgttctattccaatcctgatgtcgatgccctgctg
aaaaaagcggtgtcggtgacggatcagaaacagcggacagactactaccagcaggcgcag
aaaatcgtcatcgacgaagcggcgtatgtctatctgttccagaaaaactatcaggtcgcg
atgaacaaagacgtcaaaggtttcgttttcaacccgatgcttgagcaggtctttaatgtc
agtcagatgagtaagaaatag
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