Rhizobium oryzihabitans: G3A56_09615
Help
Entry
G3A56_09615 CDS
T06770
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy00300
Lysine biosynthesis
roy01100
Metabolic pathways
roy01120
Microbial metabolism in diverse environments
roy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G3A56_09615 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
roy01002
]
G3A56_09615 (dapE)
Enzymes [BR:
roy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
G3A56_09615 (dapE)
Peptidases and inhibitors [BR:
roy01002
]
Metallo peptidases
Family M20
G3A56_09615 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QIB38216
UniProt:
A0A7L5BHG3
LinkDB
All DBs
Position
M15-11:1824263..1825459
Genome browser
AA seq
398 aa
AA seq
DB search
MTTTDPVANLTALIRCPSVTPAEGGALSLLDTLLSPLGFAVEKMVASEAGTPDVENLYAR
LGTEGPHLMFAGHTDVVPVGDEAAWSHPPFSAEIAGGEMFGRGAVDMKGGIACFVAAIAR
YIEKHGKPEGSVSFLITGDEEGPSINGTSKLLEWAATRGEKWDACVVGEPTNPDQLGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPIRGLLQLTHALMHPPFDHGTDDFQPSNLEV
TTVDTGNAATNVIPARATAAFNIRFNDSWTVESLRAEIIRRLDAAAAEGELRPDRAPVKY
DIVWADRPAHVFLTRNNALISSLSGAVEAVTAREPRLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTRIYETFIERWFAHADGK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgatcccgttgccaatctcaccgccctcatccgttgcccttcggtgacg
cccgccgaaggtggcgcgctgtccctgctcgacaccctgctttcgccgctcggctttgcg
gtggaaaaaatggtggcgagcgaagcggggaccccggacgtggaaaacctctacgcccgg
ctcggcacggaaggtccgcacctgatgtttgcgggccatacggacgtcgtgccggtgggc
gacgaggccgcgtggagccatccgcccttttcggctgaaatcgccggcggcgaaatgttc
ggccgtggtgctgttgatatgaagggcggcatcgcctgcttcgttgcagccattgcccga
tacatcgaaaaacatggaaagcctgagggctccgtttccttcctgatcaccggcgatgag
gaaggcccgtcgatcaacggcacctccaagcttctggaatgggccgccaccaggggcgag
aaatgggatgcctgcgtggtgggcgagccgaccaatcccgaccagctgggtgacatgatc
aagatcggccgccggggatcactgtccggtcgcatcacggtgcacggcgtgcaggggcat
gccgcctatccgcatctcgccgacaaccccattcgcgggctgctgcaactgacgcacgcg
ctgatgcatccgcctttcgatcatggcacggatgattttcagccttccaatctggaagtg
acgactgtcgataccggcaacgccgccaccaatgtcattccggcacgggcgacggcggcc
ttcaatatccgcttcaacgacagctggacggtggaaagcctgcgtgcggaaatcatccgc
cgcctcgatgcagccgcagccgaaggcgagcttcgtcctgaccgcgcaccggtcaaatac
gacatcgtctgggcagaccgcccggcccatgttttcctgacgcggaacaatgctctcatc
tcgtcgctctccggcgccgtggaagccgtgacagccagggaacccaggctttcgaccacc
ggcggcacatcggatgcccgcttcatcaaggattattgcccggtggtggaattcggcctc
gtcggacagaccatgcacatggtcgatgagcgcgtggctgtcgccgatctcgagacgctg
acacgcatctacgaaacctttatcgaacgctggttcgcccatgccgacggcaagtga
DBGET
integrated database retrieval system
