Rhodopseudomonas palustris CGA009: TX73_021705
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Entry
TX73_021705 CDS
T00153
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
rpa
Rhodopseudomonas palustris CGA009
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_7
Mg_chelatase
AAA
OKR_DC_1_N
HTH_22
Phage_NinH
HTH_30
AAA_16
AAA_19
DUF2089
TetR_N
Motif
Other DBs
NCBI-ProteinID:
WCL94376
LinkDB
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Position
4730299..4731786
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AA seq
495 aa
AA seq
DB search
MVERILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEALTAPDAPAIDAVVLDLVMP
GLDGLGVLSKIRASGLDVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGIERLQVSLRNA
LNASAMKGELQRIRHAREGRLTFSDIITRSEAMAPVLRAAEKAAGSAIPVLIEGESGVGK
ELFARAIHGSSDRRSKPFVAVNCGAIPDNLVESILFGHEKGAFTGATERHDGKFVEASGG
TLFLDEVSELPLAAQVKLLRALQEGAVEAVGGRRPVKVDVRIISATNRRLLDRVKAGQFR
EDLFYRLHVLPLTIPPLRTRREDIPPLLRHFLMRFCAEEKRSIGGITGEAMVRLAQLDWP
GNIRQLENAVYRAVVMSDGDQLGLADFPLAIAPSVVPAEDTTGEPLVIERSEPQFVAASE
VPIAPLPSVGNLSMLTADDEVRPLDEMEREIIRFAISHYRGQMSEVARRLKIGRSTLYRK
LDEIEADRAAQAEAR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcgtattctgatcgccgacgacgatgcagtacagcgtcggctggtcgagaac
atggtgcagaagtgcggctatgaggcggtttcggtcgatagcggtgacgctgcggtggag
gccctgaccgcgccggatgcgcctgcgatcgacgccgtggtgctcgacctggtgatgccc
ggactcgatggcctcggcgtgctgtcgaagattcgcgccagcggactcgacgtgccggtg
atcgtgcagaccgcacatggcggcatcgacaatgtggtgtcggcgatgcgtgccggtgcg
cacgatttcgtcgttaagccggtcggcatcgagcgcctgcaggtgtccttgcgcaacgca
ctgaacgccagcgcgatgaagggcgagctgcagcgcatccgccatgcccgcgaaggccgg
ctgacattttccgacatcatcacccgcagcgaggcgatggcgccggtgttgcgcgcagcc
gagaaggctgcaggctccgcgatcccggtgctgatcgaaggtgaatccggcgtcggcaag
gagctgttcgcgcgcgccatccacggctccagcgaccgccgttcaaaaccattcgtggcc
gtgaactgcggcgcgattcccgacaatctcgtcgagtcgattctgttcggccacgagaag
ggtgcgttcaccggcgccaccgagcgccacgacggcaagttcgtcgaagcctccggcggc
acgctgtttctcgacgaggtcagcgagctgccgctggctgcgcaggtcaagctgctgcgc
gcgctgcaggaaggcgcggtcgaagcggtcggcggacgccggccggtcaaggtcgatgtc
cgcatcatctcggccaccaaccgccggttgctcgaccgggtgaaagcgggccaattccgc
gaagatctgttctaccggctgcacgtgctgccgctgacgatcccgccgctgcgcacccgc
cgcgaagacattccgccgctgctgcgacacttcctgatgcggttctgcgccgaagagaag
cgcagcatcggcggcatcaccggcgaggcgatggtgcggctggcgcaactcgactggccg
ggcaatatccgccagctcgaaaatgcggtgtatcgcgccgtggtaatgagcgacggcgat
cagctcggcctcgccgacttcccgctggcgatcgcgccgtcggtcgtccctgcagaagat
acaaccggcgagccgctggtgatcgaacgcagcgagccacaatttgtcgccgcaagcgaa
gtgccgatcgcgccgctgccgagcgtcggcaatctgtcgatgctgacagcggacgacgaa
gtgcgtcccctcgacgaaatggagcgggagatcatccggtttgcgatctcgcattatcgc
ggccagatgtcggaagtggcgcggcggctgaagatcggccgctcgacgctgtatcgcaaa
ctcgacgagatcgaagccgaccgcgccgcgcaggccgaggcgcgataa
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