Rhodopseudomonas palustris HaA2: RPB_0004
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Entry
RPB_0004 CDS
T00321
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RPB_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_0004
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RPB_0004
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
AAA_30
ABC_tran
AAA_27
SbcC_Walker_B
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABD04716
UniProt:
Q2J494
LinkDB
All DBs
Position
4098..5234
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AA seq
378 aa
AA seq
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MTASRITRLTLTHFRNYRAAVLTTSAERVVLVGANGAGKTNCLEAISFLSPGRGLRRATL
DDVADNEGDGSWAVAAEVEGALGLATLGTGIDPPRADAATSRRCRIDREPVGSATAFGDH
LRMVWLTPAMDGLFMGAASERRRFFDRLVLAIDSQHSGRVSALDRSLRSRNRLLEVRYPD
AHWLDAIERETAELAVAVAAMRGQTAMRLAAMLDARGAASAFPSAKIMLDGWMESALLTE
PATAVEDRYRTILREGRPRDAAAGRTLDGPHLTDLEVVYAPKAMPARDASTGEQKALLIG
LVLAHAQLVSEMTGITPLLLLDEVVAHLDPSRRAALFEELAKLGAQVWMTGADPAAFAEI
GSGAEIFTVESGRIRPQQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctcccgcatcacccggctgacgttgacgcatttccgcaattatcgggcggcg
gtgctgacgacgagtgccgagcgcgtggtgctggtcggcgccaacggcgccggcaagacc
aattgcctcgaggcgatctcgtttctgtcgccggggcgggggttgcggcgggcgacgctg
gacgacgtcgccgacaatgagggcgacggctcctgggcggtggcggcggaggtcgagggc
gcgctcgggctggcgacgctcggcaccgggatcgatccgccgcgcgccgacgccgcgacc
tcgcggcgctgccggatcgaccgcgagccggtcggctccgccaccgcattcggcgatcac
ttacgcatggtgtggctgacgccggcgatggacgggctgttcatgggcgcggcctcggaa
cggcggcggttcttcgaccggctggtgctggcgatcgacagccagcattcgggccgggtc
tcggcgctggaccgcagcctcagatcgcggaaccgcctgctggaggtacgttaccccgac
gcgcattggctcgatgcgatcgagcgcgaaaccgccgagctcgcggtcgcggtcgcggcg
atgcgcggccagaccgcgatgcgcctcgccgcgatgctcgacgcccgcggcgcggcatcg
gcgtttccgtcggcgaagatcatgctcgacggctggatggagagcgcgctgctcaccgaa
cccgccacggcggtggaagatcgctaccgcaccatcctgcgcgagggccgcccgcgcgac
gccgccgccggccgcaccctcgacggcccgcatctgaccgacctcgaagtcgtctacgcg
ccgaaggcgatgccggcgcgcgacgcctccaccggcgaacagaaggcgctgctgatcggg
ctcgtcctcgcgcatgcgcagctcgtctcggagatgaccggcatcacgccgctgctgctg
ctcgacgaggtggtggcgcatctcgacccgtcgcggcgcgccgcgctgttcgaggaattg
gcgaagctcggcgcccaggtctggatgaccggcgccgaccccgcagcgttcgccgagatc
ggttccggcgccgagatattcaccgtcgaatccggccggatcaggccgcaacaatga
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