Rhodopseudomonas palustris HaA2: RPB_3077
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Entry
RPB_3077 CDS
T00321
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00061
Fatty acid biosynthesis
rpb00071
Fatty acid degradation
rpb01100
Metabolic pathways
rpb01212
Fatty acid metabolism
rpb02024
Quorum sensing
Module
rpb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPB_3077
00071 Fatty acid degradation
RPB_3077
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPB_3077
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpb01004
]
RPB_3077
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpb04147
]
RPB_3077
Enzymes [BR:
rpb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPB_3077
Lipid biosynthesis proteins [BR:
rpb01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RPB_3077
Exosome [BR:
rpb04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPB_3077
Exosomal proteins of breast cancer cells
RPB_3077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD07776
UniProt:
Q2IVI4
LinkDB
All DBs
Position
complement(3507825..3509363)
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AA seq
512 aa
AA seq
DB search
MSFRWKNLGDLVDRSRGLDRPAIIDLRSPEPRVWTHSEIDRLGNGVASYLTGLGLARGTT
VAILSLNRAEYIAAYFGIMRAGFVALPVNTKQPAETIDFVLRDSDTKFAFVDTASRQLLP
AGLAFLDFDEAGPEGFAARIVPGEFETVEAQRGELGQILYTSGSTGRPKGVELSHDSQLW
ALAAKGVSADTCDEVYIIAQPLFHMNGLFGAKSIFASNASMVLMPGFDSRRYLQAMADHG
VTAVTAVPTMFARLLREPDLLAANDYSRLKRLALASAPITRAMADKIQAAFPHAMLTHGY
GTTEAGPSVFGPHPEGKPLPPLTIGYPIDPSMVKLVDGPNDNEGVLLMRNPALMTRYRGM
PDKTASVMRDGWYYSGDVMRRDEDGFYYFIGRADDMFVCGGENIYPGDVEKMLETHPAVR
QAAVVPLADEERGQMPVAFLVLADGQSATTEDIKAYALRNGPTYQHPRRVSFVADLPWAG
TNKIDRAALIREAKQLEATNGWSVSSHAEAAA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccgatggaagaacctcggagatttggtggatcgctcgcgcggtctcgatcgt
cccgcgatcatcgatctgcggtccccggagccgagggtctggacccatagcgagatcgat
aggctcggaaatggcgtggcgtcttatttgaccgggcttggcttggcgcgtggaacgacg
gtcgccattctctcgctcaaccgtgcggagtacattgcggcgtatttcggcatcatgcgc
gccggcttcgtcgcgctgccggtcaacaccaagcagccggccgaaacgatcgattttgtg
ctgcgcgactccgacaccaagtttgccttcgtcgatacagcctcgcgtcagcttctgccg
gcgggcttagcgttcctcgacttcgacgaggcgggacccgaaggttttgccgcgcgcatc
gtgccgggcgaattcgaaacggtggaggcgcagcggggcgaacttggacagatcctctac
acctccggctccaccggacggccgaagggcgtcgagctcagccacgacagccaactgtgg
gcgcttgccgccaagggcgtcagcgccgacacctgcgacgaggtctacatcatcgcccag
ccgctgttccacatgaacggtctgttcggcgccaagagcatcttcgccagcaatgcgagc
atggttctgatgccgggcttcgacagccggcgctatctgcaggccatggcggatcatggc
gtcaccgcggttactgcggtgccgacaatgttcgcgcggctgctgcgcgagcccgacctc
ttggccgccaacgattatagccggctgaagcggctggcgctggcctctgcgccgatcacc
agggccatggccgacaagattcaggcggcgtttccgcatgccatgctgactcacggctac
ggcaccacggaggccggcccgtccgtgttcggccctcatccggagggcaagccgctgccg
ccgctcacgatcggctatccgatcgacccgtcgatggtgaagctggtcgacggcccgaac
gacaacgagggcgtgctgctgatgcgcaatccggcgctgatgacgcgctatcgcggcatg
ccggacaagaccgcctcggtgatgcgtgacggctggtactacagcggcgatgtcatgcgt
cgcgacgaggacggcttctattatttcatcggccgggccgacgatatgttcgtctgcggc
ggcgagaacatctatcccggcgacgtcgagaagatgctggagacgcatccggcagtgcgc
caggccgcggtcgttcctctcgccgacgaggagcgcggacagatgccggtggctttcctc
gtgttggccgacggccaaagtgccacgaccgaagacatcaaggcctacgcgctgcgcaac
gggccgacctatcagcatccgcgccgcgtcagcttcgtggccgatctgccgtgggccggc
accaacaagatcgatcgcgcggcgctgatccgcgaggccaagcaactggaagccaccaat
ggctggtcggtttcctcccacgccgaagccgccgcatga
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