Rhodopseudomonas palustris BisB18: RPC_0245
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Entry
RPC_0245 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00280
Valine, leucine and isoleucine degradation
rpc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPC_0245
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
RPC_0245
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD85820
UniProt:
Q21CR6
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Position
258610..260124
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AA seq
504 aa
AA seq
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MNANLFAQLFDGLEDPARLAIETEDGGRISYGDLMSRAGRVANVLVARGVKIEDRVAAQT
EKSVAALVLYLATVRIGAVYLPLNTAYTLNELDYFITDAEPSLVVCDPAKRDGIAAIAAK
VGAAVETLGADGEGSLTEASAAAAPAFETVKRAGGDLAAILYTSGTTGRSKGAMLTHDNL
ASNSKTLVDYWHFTDKDVLIHALPIYHTHGLFVASNVTLFARASMIFLPKLDPERIITLM
ARATVLMGVPTFYTRMLRSERLTREATGHMRLFISGSAPLLADTHREWAARTGHAVLERY
GMTETNMNTSNPYEGVRLPGSVGPALPGVDARVVDAVSGVELPRGEIGMIEVKGPNVFKG
YWRLPEKTNAEFRHDGYFITGDLGTIDDNGYVSILGRGKDLVITGGFNVYPKEVESEIDA
LPGVLESAVIGVPHADLGEGVTAIVVREQGADCSEATVLGALEGQIAKFKMPKRVMFVDE
LPRNTMGKVQKNLLRETYANLYAK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctaatctgttcgcccaactgttcgacggcctcgaggatccggcaaggctcgcg
atcgagaccgaggatggcggccggatcagctatggcgatctgatgagccgcgccgggcgg
gtggccaacgtgctggtcgcgcgcggcgtcaagatcgaagaccgcgtcgcggcgcaaacc
gaaaagtccgtggcagcgctggtgctgtatctcgccaccgtgcgcatcggcgcggtctat
ctgccgctcaataccgcgtacacgctcaacgaactggattatttcatcaccgacgccgag
ccgtcgctggtggtgtgcgatccggcgaagcgggatggcatcgcggcgatcgccgccaag
gtcggcgcggcggtggagacgctcggcgccgacggcgaaggctcgctgaccgaggcatcg
gccgccgccgcgccggcgttcgagaccgtcaagcgcgccggcggtgatctcgcggcgatc
ctctacacttcaggaacgaccgggcgctccaagggcgcgatgctgacgcacgacaatctg
gcctcgaattcgaaaacgctggtggattattggcacttcaccgacaaggacgtgctgatc
cacgcgctgccgatctatcacacccacgggctgttcgtggccagcaacgtcacgctgttc
gcccgcgcatcgatgatcttcctgccgaagctcgatccggagcggatcatcaccttgatg
gcgcgcgccaccgtgctgatgggggtgccgaccttctatacccggatgttgcggagcgag
cgactgacccgggaggcgaccggccacatgcggctgttcatctccggctcggcgcctctc
ctcgccgacacccatcgcgaatgggcggcgcgcaccggccacgccgtgctggagcgctac
ggcatgaccgagaccaacatgaatacgtccaacccctatgagggcgtccggctgccgggc
tcggtcggcccggcgctgcccggcgtcgatgcgcgggtggtcgacgcggtcagcggtgtc
gagctgccgcgcggcgagatcggcatgatcgaggtcaaaggccccaacgtgttcaagggc
tattggcggctgccggaaaagaccaacgccgaattccgtcacgacggctacttcatcacc
ggcgatctcggcacgatcgacgacaacggctacgtctccatcctcggtcgcggcaaggat
ctggtgatcaccggcggcttcaacgtctatccgaaagaagtcgaaagcgagatcgacgcg
ctgccgggcgtgctggaatccgcggtgatcggcgtgccgcatgccgatctcggcgagggc
gtcaccgcgattgtggtgcgcgagcagggcgccgattgcagcgaggcgacggtgctcggc
gcgctcgagggacagatcgccaaattcaagatgccgaagcgggtgatgttcgtcgacgag
ctgccgcgcaacaccatgggcaaagtgcagaagaacctgctgcgcgagacctatgccaat
ctctacgccaagtaa
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